Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RSPO3Q9BXY4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RSPO3Q9BXY4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.88■□□□□ 0.77
RSPO3Q9BXY4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.87■□□□□ 0.77
RSPO3Q9BXY4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 OR7E47P-201ENST00000546390 1422 ntBASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RSPO3Q9BXY4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 SLC47A1P1-202ENST00000449666 945 ntBASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RSPO3Q9BXY4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
RSPO3Q9BXY4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 OXCT2P1-201ENST00000447263 1535 ntBASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 AC010141.3-201ENST00000456659 717 ntBASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 AC136469.2-201ENST00000623944 1028 ntBASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 AC068587.7-201ENST00000641602 218 ntBASIC19.83■□□□□ 0.77
RSPO3Q9BXY4 SYT6-210ENST00000641643 1587 ntBASIC19.83■□□□□ 0.76
RSPO3Q9BXY4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RSPO3Q9BXY4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 AL138724.1-201ENST00000606771 1088 ntBASIC19.82■□□□□ 0.76
RSPO3Q9BXY4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms