Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LRFN3Q9BTN0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN3Q9BTN0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRFN3Q9BTN0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 AC138907.5-202ENST00000569484 235 ntBASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRFN3Q9BTN0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.88■■□□□ 1.09
LRFN3Q9BTN0 SLC6A10P-202ENST00000431994 2058 ntBASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 AC010980.2-201ENST00000587099 1412 ntBASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 AC144652.1-201ENST00000609974 1624 ntBASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.87■■□□□ 1.09
LRFN3Q9BTN0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 AC012618.2-201ENST00000428058 849 ntBASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 TSPY15P-201ENST00000457163 923 ntBASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 AC233702.5-201ENST00000584107 538 ntBASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
LRFN3Q9BTN0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 KRT17P3-201ENST00000420566 1262 ntBASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 AC010501.1-201ENST00000606270 1962 ntBASIC21.85■■□□□ 1.09
LRFN3Q9BTN0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRFN3Q9BTN0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.83■■□□□ 1.09
LRFN3Q9BTN0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.83■■□□□ 1.08
LRFN3Q9BTN0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LRFN3Q9BTN0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms