Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC12.74□□□□□ -0.37
LIMD2Q9BT23 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LIMD2Q9BT23 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 AF106564.1-201ENST00000607058 2553 ntBASIC12.72□□□□□ -0.37
LIMD2Q9BT23 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 ASB1-202ENST00000409297 878 ntTSL 5 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 SRD5A1P1-201ENST00000442297 786 ntBASIC12.72□□□□□ -0.37
LIMD2Q9BT23 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 AC233723.2-201ENST00000623798 2106 ntBASIC12.72□□□□□ -0.37
LIMD2Q9BT23 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 VGF-203ENST00000611537 1622 ntTSL 5 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
LIMD2Q9BT23 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LIMD2Q9BT23 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 AC007375.3-201ENST00000600936 2314 ntBASIC12.71□□□□□ -0.38
LIMD2Q9BT23 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
LIMD2Q9BT23 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC12.7□□□□□ -0.38
LIMD2Q9BT23 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms