Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF6BQ99941 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
ATF6BQ99941 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF6BQ99941 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF6BQ99941 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATF6BQ99941 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF6BQ99941 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF6BQ99941 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
ATF6BQ99941 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.23■□□□□ 0.67
ATF6BQ99941 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.23■□□□□ 0.67
ATF6BQ99941 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF6BQ99941 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATF6BQ99941 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATF6BQ99941 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
ATF6BQ99941 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ATF6BQ99941 SRD5A1P1-201ENST00000442297 786 ntBASIC19.22■□□□□ 0.67
ATF6BQ99941 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.22■□□□□ 0.67
ATF6BQ99941 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.22■□□□□ 0.67
ATF6BQ99941 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.22■□□□□ 0.67
ATF6BQ99941 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF6BQ99941 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF6BQ99941 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF6BQ99941 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ATF6BQ99941 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATF6BQ99941 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATF6BQ99941 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ATF6BQ99941 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF6BQ99941 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.21■□□□□ 0.67
ATF6BQ99941 AC099791.2-201ENST00000605725 427 ntBASIC19.21■□□□□ 0.67
ATF6BQ99941 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.21■□□□□ 0.67
ATF6BQ99941 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.21■□□□□ 0.67
ATF6BQ99941 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.21■□□□□ 0.67
ATF6BQ99941 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATF6BQ99941 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATF6BQ99941 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.21■□□□□ 0.67
ATF6BQ99941 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.2■□□□□ 0.66
ATF6BQ99941 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATF6BQ99941 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
ATF6BQ99941 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.2■□□□□ 0.66
ATF6BQ99941 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
ATF6BQ99941 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATF6BQ99941 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.19■□□□□ 0.66
ATF6BQ99941 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF6BQ99941 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF6BQ99941 AC006455.2-201ENST00000429931 906 ntBASIC19.19■□□□□ 0.66
ATF6BQ99941 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF6BQ99941 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF6BQ99941 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
ATF6BQ99941 AL512631.2-201ENST00000604634 923 ntBASIC19.19■□□□□ 0.66
ATF6BQ99941 AC092171.4-201ENST00000609130 632 ntBASIC19.19■□□□□ 0.66
ATF6BQ99941 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATF6BQ99941 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.19■□□□□ 0.66
ATF6BQ99941 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
ATF6BQ99941 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF6BQ99941 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF6BQ99941 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATF6BQ99941 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF6BQ99941 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF6BQ99941 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF6BQ99941 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF6BQ99941 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.18■□□□□ 0.66
ATF6BQ99941 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.18■□□□□ 0.66
ATF6BQ99941 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF6BQ99941 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.18■□□□□ 0.66
ATF6BQ99941 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.18■□□□□ 0.66
ATF6BQ99941 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF6BQ99941 pRNA.6-201ENST00000610482 90 ntBASIC19.18■□□□□ 0.66
ATF6BQ99941 pRNA.5-201ENST00000612139 90 ntBASIC19.18■□□□□ 0.66
ATF6BQ99941 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF6BQ99941 pRNA.11-201ENST00000618423 90 ntBASIC19.18■□□□□ 0.66
ATF6BQ99941 pRNA.13-201ENST00000619112 90 ntBASIC19.18■□□□□ 0.66
ATF6BQ99941 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATF6BQ99941 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.18■□□□□ 0.66
ATF6BQ99941 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms