Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH15Q96QU1 POU5F1P3-201ENST00000428824 1078 ntBASIC21.2■□□□□ 0.98
PCDH15Q96QU1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
PCDH15Q96QU1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.2■□□□□ 0.98
PCDH15Q96QU1 DUSP8P5-201ENST00000422884 1815 ntBASIC21.2■□□□□ 0.98
PCDH15Q96QU1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCDH15Q96QU1 FAM201B-201ENST00000458407 597 ntBASIC21.19■□□□□ 0.98
PCDH15Q96QU1 AC105036.2-201ENST00000569468 176 ntBASIC21.19■□□□□ 0.98
PCDH15Q96QU1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 AC013268.1-206ENST00000638368 961 ntBASIC21.19■□□□□ 0.98
PCDH15Q96QU1 AC112229.1-201ENST00000639295 961 ntBASIC21.19■□□□□ 0.98
PCDH15Q96QU1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDH15Q96QU1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDH15Q96QU1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 SLC7A5P1-201ENST00000568957 537 ntBASIC21.17■□□□□ 0.98
PCDH15Q96QU1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCDH15Q96QU1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 RNA5SP413-201ENST00000516373 109 ntBASIC21.16■□□□□ 0.98
PCDH15Q96QU1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH15Q96QU1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 AC068338.2-201ENST00000563278 1430 ntBASIC21.15■□□□□ 0.98
PCDH15Q96QU1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH15Q96QU1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH15Q96QU1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDH15Q96QU1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
PCDH15Q96QU1 AC098590.1-201ENST00000468126 897 ntBASIC21.14■□□□□ 0.98
PCDH15Q96QU1 AC007322.4-201ENST00000509611 723 ntBASIC21.14■□□□□ 0.98
PCDH15Q96QU1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.14■□□□□ 0.98
PCDH15Q96QU1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH15Q96QU1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH15Q96QU1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH15Q96QU1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
PCDH15Q96QU1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH15Q96QU1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH15Q96QU1 RPS2P52-201ENST00000469610 820 ntBASIC21.13■□□□□ 0.97
PCDH15Q96QU1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PCDH15Q96QU1 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH15Q96QU1 MKRN4P-201ENST00000444706 1521 ntBASIC21.13■□□□□ 0.97
PCDH15Q96QU1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 AC083880.1-201ENST00000608266 535 ntBASIC21.12■□□□□ 0.97
PCDH15Q96QU1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH15Q96QU1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms