Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 TMPOP1-202ENST00000424642 1267 ntBASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CNTNAP3BQ96NU0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 AC093787.1-201ENST00000450396 207 ntBASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 RPPH1-201ENST00000516869 333 ntBASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.65■□□□□ 0.9
CNTNAP3BQ96NU0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.64■□□□□ 0.9
CNTNAP3BQ96NU0 KRT87P-202ENST00000534226 1464 ntBASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP3BQ96NU0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CNTNAP3BQ96NU0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 C1QBPP2-201ENST00000528754 825 ntBASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 AP001160.3-201ENST00000601484 763 ntBASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP3BQ96NU0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 AC068338.2-201ENST00000563278 1430 ntBASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 AC091874.3-201ENST00000512672 1195 ntBASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 OR10C1-204ENST00000622521 1039 ntBASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP3BQ96NU0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNTNAP3BQ96NU0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms