Protein–RNA interactions for Protein: Q96FV3

TSPAN17, Tetraspanin-17, humanhuman

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17Q96FV3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 SYT6-210ENST00000641643 1587 ntBASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN17Q96FV3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN17Q96FV3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN17Q96FV3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.35■■□□□ 1.01
TSPAN17Q96FV3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 AC010525.1-201ENST00000585559 441 ntBASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TSPAN17Q96FV3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 MIR4466-201ENST00000606121 54 ntBASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 AC011298.3-201ENST00000615796 283 ntBASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 AC136469.2-201ENST00000623944 1028 ntBASIC21.33■■□□□ 1.01
TSPAN17Q96FV3 OXCT2P1-201ENST00000447263 1535 ntBASIC21.33■■□□□ 1
TSPAN17Q96FV3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TSPAN17Q96FV3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TSPAN17Q96FV3 AC026310.3-201ENST00000625186 2373 ntBASIC21.32■■□□□ 1
TSPAN17Q96FV3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.32■■□□□ 1
TSPAN17Q96FV3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.32■■□□□ 1
TSPAN17Q96FV3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.32■■□□□ 1
TSPAN17Q96FV3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN17Q96FV3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.32■■□□□ 1
TSPAN17Q96FV3 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.32■■□□□ 1
TSPAN17Q96FV3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN17Q96FV3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.32■■□□□ 1
TSPAN17Q96FV3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN17Q96FV3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TSPAN17Q96FV3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN17Q96FV3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN17Q96FV3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 AC104564.3-201ENST00000582367 638 ntBASIC21.31■■□□□ 1
TSPAN17Q96FV3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TSPAN17Q96FV3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TSPAN17Q96FV3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms