Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 AL157384.1-201ENST00000445995 2473 ntBASIC21.1■□□□□ 0.97
SPDL1Q96EA4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDL1Q96EA4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.09■□□□□ 0.97
SPDL1Q96EA4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDL1Q96EA4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPDL1Q96EA4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.08■□□□□ 0.96
SPDL1Q96EA4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPDL1Q96EA4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPDL1Q96EA4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SPDL1Q96EA4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDL1Q96EA4 LINC01529-204ENST00000636474 1715 ntBASIC21.07■□□□□ 0.96
SPDL1Q96EA4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 AC005229.4-201ENST00000610085 2198 ntBASIC21.06■□□□□ 0.96
SPDL1Q96EA4 LINC01521-201ENST00000504184 1943 ntBASIC21.06■□□□□ 0.96
SPDL1Q96EA4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 MIR4508-201ENST00000584178 70 ntBASIC21.06■□□□□ 0.96
SPDL1Q96EA4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.06■□□□□ 0.96
SPDL1Q96EA4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 TSPY13P-201ENST00000338964 914 ntBASIC21.05■□□□□ 0.96
SPDL1Q96EA4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPDL1Q96EA4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDL1Q96EA4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms