Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RHBDF1Q96CC6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RHBDF1Q96CC6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RHBDF1Q96CC6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21■□□□□ 0.95
RHBDF1Q96CC6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21■□□□□ 0.95
RHBDF1Q96CC6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 AC007375.3-201ENST00000600936 2314 ntBASIC21■□□□□ 0.95
RHBDF1Q96CC6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RHBDF1Q96CC6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHBDF1Q96CC6 AC233992.3-201ENST00000607491 485 ntBASIC20.99■□□□□ 0.95
RHBDF1Q96CC6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.99■□□□□ 0.95
RHBDF1Q96CC6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHBDF1Q96CC6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.99■□□□□ 0.95
RHBDF1Q96CC6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RHBDF1Q96CC6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RHBDF1Q96CC6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RHBDF1Q96CC6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 PBX2P1-201ENST00000493219 1291 ntBASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 AC133561.4-201ENST00000566112 224 ntBASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 AC106739.1-201ENST00000617035 715 ntBASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RHBDF1Q96CC6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
RHBDF1Q96CC6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 AC026471.6-201ENST00000622954 1905 ntBASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RHBDF1Q96CC6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 AC110285.6-201ENST00000617652 491 ntBASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.94■□□□□ 0.94
RHBDF1Q96CC6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.93■□□□□ 0.94
RHBDF1Q96CC6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.93■□□□□ 0.94
RHBDF1Q96CC6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RHBDF1Q96CC6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RHBDF1Q96CC6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RHBDF1Q96CC6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.93■□□□□ 0.94
RHBDF1Q96CC6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms