Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 AC010525.1-201ENST00000585559 441 ntBASIC22.57■■□□□ 1.2
RNF25Q96BH1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF25Q96BH1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF25Q96BH1 FAM99A-202ENST00000538190 1989 ntBASIC22.57■■□□□ 1.2
RNF25Q96BH1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF25Q96BH1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF25Q96BH1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF25Q96BH1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF25Q96BH1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.56■■□□□ 1.2
RNF25Q96BH1 AC079089.2-201ENST00000531211 1277 ntBASIC22.56■■□□□ 1.2
RNF25Q96BH1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF25Q96BH1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF25Q96BH1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RNF25Q96BH1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF25Q96BH1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF25Q96BH1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF25Q96BH1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF25Q96BH1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RNF25Q96BH1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.55■■□□□ 1.2
RNF25Q96BH1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 AC131281.2-201ENST00000520478 145 ntBASIC22.55■■□□□ 1.2
RNF25Q96BH1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF25Q96BH1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF25Q96BH1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF25Q96BH1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF25Q96BH1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF25Q96BH1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF25Q96BH1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF25Q96BH1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF25Q96BH1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RNF25Q96BH1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF25Q96BH1 OR2I1P-207ENST00000453522 948 ntBASIC22.54■■□□□ 1.2
RNF25Q96BH1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF25Q96BH1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF25Q96BH1 SYT6-210ENST00000641643 1587 ntBASIC22.54■■□□□ 1.2
RNF25Q96BH1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF25Q96BH1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF25Q96BH1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.53■■□□□ 1.2
RNF25Q96BH1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF25Q96BH1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF25Q96BH1 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF25Q96BH1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF25Q96BH1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
RNF25Q96BH1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF25Q96BH1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF25Q96BH1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF25Q96BH1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF25Q96BH1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF25Q96BH1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF25Q96BH1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF25Q96BH1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF25Q96BH1 NIFKP4-201ENST00000567275 1192 ntBASIC22.52■■□□□ 1.2
RNF25Q96BH1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF25Q96BH1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF25Q96BH1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF25Q96BH1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF25Q96BH1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF25Q96BH1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF25Q96BH1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF25Q96BH1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 AC120057.1-201ENST00000483947 663 ntBASIC22.5■■□□□ 1.19
RNF25Q96BH1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RNF25Q96BH1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF25Q96BH1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms