Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VPS33AQ96AX1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
VPS33AQ96AX1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
VPS33AQ96AX1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
VPS33AQ96AX1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 TSPY9P-201ENST00000440215 945 ntBASIC20.63■□□□□ 0.89
VPS33AQ96AX1 TSPY11P-201ENST00000442607 1045 ntBASIC20.63■□□□□ 0.89
VPS33AQ96AX1 AC239859.2-201ENST00000444165 318 ntBASIC20.63■□□□□ 0.89
VPS33AQ96AX1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
VPS33AQ96AX1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VPS33AQ96AX1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 AC026471.6-201ENST00000622954 1905 ntBASIC20.61■□□□□ 0.89
VPS33AQ96AX1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VPS33AQ96AX1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 RARRES2P1-201ENST00000474487 481 ntBASIC20.6■□□□□ 0.89
VPS33AQ96AX1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
VPS33AQ96AX1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VPS33AQ96AX1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.58■□□□□ 0.89
VPS33AQ96AX1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VPS33AQ96AX1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS33AQ96AX1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VPS33AQ96AX1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms