Protein–RNA interactions for Protein: Q96A61

TRIM52, Tripartite motif-containing protein 52, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM52Q96A61 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.97■■■□□ 2.71
TRIM52Q96A61 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.97■■■□□ 2.71
TRIM52Q96A61 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIM52Q96A61 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.96■■■□□ 2.71
TRIM52Q96A61 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC31.95■■■□□ 2.71
TRIM52Q96A61 AC133561.1-201ENST00000568600 2415 ntBASIC31.95■■■□□ 2.71
TRIM52Q96A61 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM52Q96A61 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.95■■■□□ 2.71
TRIM52Q96A61 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.95■■■□□ 2.71
TRIM52Q96A61 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.95■■■□□ 2.71
TRIM52Q96A61 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.95■■■□□ 2.71
TRIM52Q96A61 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC31.95■■■□□ 2.7
TRIM52Q96A61 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TRIM52Q96A61 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM52Q96A61 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.94■■■□□ 2.7
TRIM52Q96A61 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.94■■■□□ 2.7
TRIM52Q96A61 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM52Q96A61 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC31.94■■■□□ 2.7
TRIM52Q96A61 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM52Q96A61 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC31.93■■■□□ 2.7
TRIM52Q96A61 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.93■■■□□ 2.7
TRIM52Q96A61 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM52Q96A61 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.93■■■□□ 2.7
TRIM52Q96A61 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM52Q96A61 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TRIM52Q96A61 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM52Q96A61 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM52Q96A61 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM52Q96A61 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.92■■■□□ 2.7
TRIM52Q96A61 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.92■■■□□ 2.7
TRIM52Q96A61 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM52Q96A61 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC31.92■■■□□ 2.7
TRIM52Q96A61 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC31.92■■■□□ 2.7
TRIM52Q96A61 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM52Q96A61 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM52Q96A61 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
TRIM52Q96A61 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM52Q96A61 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
TRIM52Q96A61 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
TRIM52Q96A61 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM52Q96A61 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM52Q96A61 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM52Q96A61 AC137761.2-201ENST00000561729 223 ntBASIC31.91■■■□□ 2.7
TRIM52Q96A61 AC145350.3-201ENST00000569033 163 ntBASIC31.91■■■□□ 2.7
TRIM52Q96A61 C1orf229-201ENST00000623686 2258 ntBASIC31.91■■■□□ 2.7
TRIM52Q96A61 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
TRIM52Q96A61 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.91■■■□□ 2.7
TRIM52Q96A61 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM52Q96A61 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.9■■■□□ 2.7
TRIM52Q96A61 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.9■■■□□ 2.7
TRIM52Q96A61 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.9■■■□□ 2.7
TRIM52Q96A61 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
TRIM52Q96A61 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
TRIM52Q96A61 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM52Q96A61 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM52Q96A61 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
TRIM52Q96A61 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM52Q96A61 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC31.89■■■□□ 2.7
TRIM52Q96A61 AC055733.4-201ENST00000638462 1354 ntBASIC31.89■■■□□ 2.7
TRIM52Q96A61 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC31.89■■■□□ 2.7
TRIM52Q96A61 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM52Q96A61 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM52Q96A61 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM52Q96A61 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM52Q96A61 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC31.88■■■□□ 2.69
TRIM52Q96A61 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
TRIM52Q96A61 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM52Q96A61 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM52Q96A61 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC31.88■■■□□ 2.69
TRIM52Q96A61 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
TRIM52Q96A61 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.88■■■□□ 2.69
TRIM52Q96A61 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
TRIM52Q96A61 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM52Q96A61 AC139530.1-201ENST00000575312 1977 ntBASIC31.87■■■□□ 2.69
TRIM52Q96A61 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
TRIM52Q96A61 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC31.87■■■□□ 2.69
TRIM52Q96A61 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM52Q96A61 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.87■■■□□ 2.69
TRIM52Q96A61 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TRIM52Q96A61 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM52Q96A61 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM52Q96A61 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM52Q96A61 AC016769.1-201ENST00000409132 1010 ntBASIC31.86■■■□□ 2.69
TRIM52Q96A61 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM52Q96A61 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM52Q96A61 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM52Q96A61 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC31.86■■■□□ 2.69
TRIM52Q96A61 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms