Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
SMARCC1Q92922 AC068338.2-201ENST00000563278 1430 ntBASIC27.82■■■□□ 2.04
SMARCC1Q92922 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC1Q92922 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC1Q92922 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC1Q92922 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC1Q92922 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC1Q92922 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.81■■■□□ 2.04
SMARCC1Q92922 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.81■■■□□ 2.04
SMARCC1Q92922 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.81■■■□□ 2.04
SMARCC1Q92922 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.81■■■□□ 2.04
SMARCC1Q92922 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.81■■■□□ 2.04
SMARCC1Q92922 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SMARCC1Q92922 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
SMARCC1Q92922 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SMARCC1Q92922 KRT18P29-201ENST00000397031 1267 ntBASIC27.8■■■□□ 2.04
SMARCC1Q92922 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.8■■■□□ 2.04
SMARCC1Q92922 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.8■■■□□ 2.04
SMARCC1Q92922 CYP2T1P-201ENST00000432607 1285 ntBASIC27.8■■■□□ 2.04
SMARCC1Q92922 AC007322.4-201ENST00000509611 723 ntBASIC27.8■■■□□ 2.04
SMARCC1Q92922 RNA5SP413-201ENST00000516373 109 ntBASIC27.8■■■□□ 2.04
SMARCC1Q92922 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.8■■■□□ 2.04
SMARCC1Q92922 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.8■■■□□ 2.04
SMARCC1Q92922 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SMARCC1Q92922 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC1Q92922 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC1Q92922 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC1Q92922 MKRN4P-201ENST00000444706 1521 ntBASIC27.79■■■□□ 2.04
SMARCC1Q92922 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC1Q92922 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SMARCC1Q92922 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.79■■■□□ 2.04
SMARCC1Q92922 AP004607.7-201ENST00000527152 1677 ntBASIC27.78■■■□□ 2.04
SMARCC1Q92922 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC1Q92922 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
SMARCC1Q92922 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC1Q92922 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SMARCC1Q92922 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
SMARCC1Q92922 OR10C1-204ENST00000622521 1039 ntBASIC27.78■■■□□ 2.04
SMARCC1Q92922 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
SMARCC1Q92922 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC1Q92922 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC1Q92922 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.77■■■□□ 2.04
SMARCC1Q92922 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC1Q92922 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SMARCC1Q92922 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.76■■■□□ 2.04
SMARCC1Q92922 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.76■■■□□ 2.03
SMARCC1Q92922 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC1Q92922 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
SMARCC1Q92922 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC1Q92922 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.76■■■□□ 2.03
SMARCC1Q92922 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.76■■■□□ 2.03
SMARCC1Q92922 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC1Q92922 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC1Q92922 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SMARCC1Q92922 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.76■■■□□ 2.03
SMARCC1Q92922 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC1Q92922 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 ABCB10P4-201ENST00000566803 2184 ntBASIC27.75■■■□□ 2.03
SMARCC1Q92922 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC1Q92922 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC1Q92922 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 EEF1DP3-203ENST00000566025 782 ntBASIC27.75■■■□□ 2.03
SMARCC1Q92922 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SMARCC1Q92922 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.75■■■□□ 2.03
SMARCC1Q92922 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.74■■■□□ 2.03
SMARCC1Q92922 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
SMARCC1Q92922 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.74■■■□□ 2.03
SMARCC1Q92922 AL512625.2-201ENST00000417533 625 ntBASIC27.74■■■□□ 2.03
SMARCC1Q92922 AC092118.2-201ENST00000613495 667 ntBASIC27.74■■■□□ 2.03
SMARCC1Q92922 AC020928.2-201ENST00000588717 2197 ntBASIC27.74■■■□□ 2.03
SMARCC1Q92922 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.74■■■□□ 2.03
SMARCC1Q92922 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
SMARCC1Q92922 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.74■■■□□ 2.03
SMARCC1Q92922 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SMARCC1Q92922 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC1Q92922 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMARCC1Q92922 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.73■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms