Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AL139246.5-201ENST00000606645 996 ntBASIC21.01■□□□□ 0.95
ATL1Q8WXF7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATL1Q8WXF7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATL1Q8WXF7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATL1Q8WXF7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATL1Q8WXF7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATL1Q8WXF7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ATL1Q8WXF7 AL024507.2-201ENST00000606070 2574 ntBASIC21■□□□□ 0.95
ATL1Q8WXF7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATL1Q8WXF7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATL1Q8WXF7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21■□□□□ 0.95
ATL1Q8WXF7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATL1Q8WXF7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATL1Q8WXF7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATL1Q8WXF7 IGHV3-19-201ENST00000521488 291 ntBASIC21■□□□□ 0.95
ATL1Q8WXF7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21■□□□□ 0.95
ATL1Q8WXF7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21■□□□□ 0.95
ATL1Q8WXF7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATL1Q8WXF7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 AC099791.1-201ENST00000416440 715 ntBASIC20.99■□□□□ 0.95
ATL1Q8WXF7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 AL034346.1-201ENST00000568244 1277 ntBASIC20.99■□□□□ 0.95
ATL1Q8WXF7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATL1Q8WXF7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 AP001330.3-201ENST00000520123 633 ntBASIC20.98■□□□□ 0.95
ATL1Q8WXF7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ATL1Q8WXF7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 RASA4CP-201ENST00000424092 1398 ntBASIC20.97■□□□□ 0.95
ATL1Q8WXF7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATL1Q8WXF7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.96■□□□□ 0.95
ATL1Q8WXF7 AC091305.1-201ENST00000479476 895 ntBASIC20.96■□□□□ 0.95
ATL1Q8WXF7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.96■□□□□ 0.95
ATL1Q8WXF7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 MIR939-201ENST00000401314 82 ntBASIC20.95■□□□□ 0.94
ATL1Q8WXF7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATL1Q8WXF7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.94■□□□□ 0.94
ATL1Q8WXF7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms