Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM4Q8WVI0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 OXCT2P1-201ENST00000447263 1535 ntBASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM4Q8WVI0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM4Q8WVI0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM4Q8WVI0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM4Q8WVI0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 DUX4L4-201ENST00000566884 1269 ntBASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 MIR4281-201ENST00000580852 62 ntBASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SMIM4Q8WVI0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM4Q8WVI0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM4Q8WVI0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 AC004687.1-201ENST00000579003 1625 ntBASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 AC104564.3-201ENST00000582367 638 ntBASIC18.36■□□□□ 0.53
SMIM4Q8WVI0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SMIM4Q8WVI0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms