Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNIH3Q8TBE1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNIH3Q8TBE1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CNIH3Q8TBE1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CNIH3Q8TBE1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 KRT18P24-201ENST00000344739 1156 ntBASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 AC139795.1-202ENST00000500444 432 ntBASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 AC026471.6-201ENST00000622954 1905 ntBASIC19.63■□□□□ 0.73
CNIH3Q8TBE1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 U85056.1-201ENST00000616429 682 ntBASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CNIH3Q8TBE1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 AC007952.6-201ENST00000573168 2673 ntBASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 AC003957.1-201ENST00000625108 2673 ntBASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 FEM1AP1-201ENST00000431297 1995 ntBASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 SNX5-217ENST00000606557 1087 ntBASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CNIH3Q8TBE1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 DUX4L4-201ENST00000566884 1269 ntBASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
CNIH3Q8TBE1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.59■□□□□ 0.73
CNIH3Q8TBE1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms