Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SHKBP1Q8TBC3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 AC005224.4-201ENST00000583262 1652 ntBASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.66■■□□□ 1.22
SHKBP1Q8TBC3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 ESRRAP2-201ENST00000418437 1549 ntBASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SHKBP1Q8TBC3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.64■■□□□ 1.22
SHKBP1Q8TBC3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 AC026185.1-201ENST00000445748 174 ntBASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SHKBP1Q8TBC3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SHKBP1Q8TBC3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 AC009237.3-201ENST00000393279 1427 ntBASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SHKBP1Q8TBC3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SHKBP1Q8TBC3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SHKBP1Q8TBC3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms