Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 SUDS3P1-201ENST00000505831 966 ntBASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH19Q8TAB3 AC026471.6-201ENST00000622954 1905 ntBASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 ZNRF2P3-201ENST00000424200 374 ntBASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 AC008764.7-201ENST00000593779 1081 ntBASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 AL355001.2-201ENST00000620617 1191 ntBASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDH19Q8TAB3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDH19Q8TAB3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 AC126544.1-201ENST00000580842 1059 ntBASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH19Q8TAB3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 AC099791.1-201ENST00000416440 715 ntBASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 AP001330.3-201ENST00000520123 633 ntBASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH19Q8TAB3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 AF213884.3-201ENST00000563833 479 ntBASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH19Q8TAB3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 IGHV3-19-201ENST00000521488 291 ntBASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH19Q8TAB3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms