Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
SLC17A8Q8NDX2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
SLC17A8Q8NDX2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
SLC17A8Q8NDX2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC17A8Q8NDX2 LINC01960-201ENST00000563759 1884 ntBASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.19■■□□□ 1.46
SLC17A8Q8NDX2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 PRORSD1P-201ENST00000295112 541 ntBASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 FAM210CP-201ENST00000445714 574 ntBASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 AP005435.1-201ENST00000529293 1178 ntBASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.18■■□□□ 1.46
SLC17A8Q8NDX2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC17A8Q8NDX2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
SLC17A8Q8NDX2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.17■■□□□ 1.46
SLC17A8Q8NDX2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC17A8Q8NDX2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC17A8Q8NDX2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.17■■□□□ 1.46
SLC17A8Q8NDX2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.16■■□□□ 1.46
SLC17A8Q8NDX2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 AC069152.1-201ENST00000438030 544 ntBASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 AL121832.2-201ENST00000610979 668 ntBASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 AC068473.5-201ENST00000616428 2072 ntBASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC17A8Q8NDX2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.14■■□□□ 1.46
SLC17A8Q8NDX2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 RPS2P4-201ENST00000476944 856 ntBASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 AC010525.1-201ENST00000585559 441 ntBASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SLC17A8Q8NDX2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 AC012676.1-201ENST00000574705 1949 ntBASIC24.13■■□□□ 1.45
SLC17A8Q8NDX2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms