Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
CFAP43Q8NDM7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 AF201337.1-201ENST00000520239 748 ntBASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
CFAP43Q8NDM7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 PRORSD1P-201ENST00000295112 541 ntBASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC34.03■■■■□ 3.04
CFAP43Q8NDM7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC34.02■■■■□ 3.04
CFAP43Q8NDM7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC34.02■■■■□ 3.04
CFAP43Q8NDM7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
CFAP43Q8NDM7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC34.01■■■■□ 3.04
CFAP43Q8NDM7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC34.01■■■■□ 3.03
CFAP43Q8NDM7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
CFAP43Q8NDM7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC34.01■■■■□ 3.03
CFAP43Q8NDM7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC34.01■■■■□ 3.03
CFAP43Q8NDM7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC34■■■■□ 3.03
CFAP43Q8NDM7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC34■■■■□ 3.03
CFAP43Q8NDM7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
CFAP43Q8NDM7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC34■■■■□ 3.03
CFAP43Q8NDM7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC34■■■■□ 3.03
CFAP43Q8NDM7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC34■■■■□ 3.03
CFAP43Q8NDM7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 AC133552.2-202ENST00000575694 574 ntBASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC33.99■■■■□ 3.03
CFAP43Q8NDM7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC33.98■■■■□ 3.03
CFAP43Q8NDM7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC33.98■■■■□ 3.03
CFAP43Q8NDM7 SLC7A5P1-201ENST00000568957 537 ntBASIC33.98■■■■□ 3.03
CFAP43Q8NDM7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC33.98■■■■□ 3.03
CFAP43Q8NDM7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC33.98■■■■□ 3.03
CFAP43Q8NDM7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC33.98■■■■□ 3.03
CFAP43Q8NDM7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 UQCRFS1P1-201ENST00000435169 820 ntBASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC33.97■■■■□ 3.03
CFAP43Q8NDM7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 APTR-203ENST00000430801 583 ntTSL 5 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC33.96■■■■□ 3.03
CFAP43Q8NDM7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC33.95■■■■□ 3.03
CFAP43Q8NDM7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC33.95■■■■□ 3.03
CFAP43Q8NDM7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC33.95■■■■□ 3.03
CFAP43Q8NDM7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.02
CFAP43Q8NDM7 OXCT2P1-201ENST00000447263 1535 ntBASIC33.95■■■■□ 3.02
CFAP43Q8NDM7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
CFAP43Q8NDM7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 AC005224.4-201ENST00000583262 1652 ntBASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
CFAP43Q8NDM7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 RNA5SP413-201ENST00000516373 109 ntBASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC33.93■■■■□ 3.02
CFAP43Q8NDM7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC33.92■■■■□ 3.02
CFAP43Q8NDM7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms