Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 ID1-201ENST00000376105 1233 ntBASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC38A9Q8NBW4 OR7E47P-201ENST00000546390 1422 ntBASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 AC137767.1-201ENST00000602918 1920 ntBASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC38A9Q8NBW4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SLC38A9Q8NBW4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC38A9Q8NBW4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 AC011767.1-201ENST00000617410 1153 ntBASIC20.33■□□□□ 0.85
SLC38A9Q8NBW4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC38A9Q8NBW4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.33■□□□□ 0.84
SLC38A9Q8NBW4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC38A9Q8NBW4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 HLA-L-209ENST00000420110 1011 ntBASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 AC026185.1-201ENST00000445748 174 ntBASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC38A9Q8NBW4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 KRT18P11-201ENST00000435214 1283 ntBASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.3■□□□□ 0.84
SLC38A9Q8NBW4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms