Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
CCNYL1Q8N7R7 AL024507.2-201ENST00000606070 2574 ntBASIC21.21■□□□□ 0.99
CCNYL1Q8N7R7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.21■□□□□ 0.99
CCNYL1Q8N7R7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCNYL1Q8N7R7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCNYL1Q8N7R7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCNYL1Q8N7R7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 AC241377.3-202ENST00000626088 1088 ntBASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 AC241585.3-202ENST00000628937 1088 ntBASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 AC245100.8-202ENST00000629247 1058 ntBASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNYL1Q8N7R7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNYL1Q8N7R7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 AC133637.1-201ENST00000624115 1537 ntBASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNYL1Q8N7R7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 AC006455.2-201ENST00000429931 906 ntBASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNYL1Q8N7R7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 pRNA.6-201ENST00000610482 90 ntBASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 pRNA.5-201ENST00000612139 90 ntBASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 pRNA.11-201ENST00000618423 90 ntBASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 pRNA.13-201ENST00000619112 90 ntBASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNYL1Q8N7R7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCNYL1Q8N7R7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms