Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COMMD1Q8N668 ALDH1A3-203ENST00000557963 1670 ntBASIC17.77■□□□□ 0.43
COMMD1Q8N668 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COMMD1Q8N668 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.76■□□□□ 0.43
COMMD1Q8N668 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.76■□□□□ 0.43
COMMD1Q8N668 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD1Q8N668 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
COMMD1Q8N668 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD1Q8N668 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD1Q8N668 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD1Q8N668 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COMMD1Q8N668 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COMMD1Q8N668 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
COMMD1Q8N668 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.73■□□□□ 0.43
COMMD1Q8N668 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.73■□□□□ 0.43
COMMD1Q8N668 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.73■□□□□ 0.43
COMMD1Q8N668 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
COMMD1Q8N668 FAM99A-202ENST00000538190 1989 ntBASIC17.73■□□□□ 0.43
COMMD1Q8N668 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
COMMD1Q8N668 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD1Q8N668 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD1Q8N668 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD1Q8N668 AC133561.4-201ENST00000566112 224 ntBASIC17.72■□□□□ 0.43
COMMD1Q8N668 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 AC241377.3-202ENST00000626088 1088 ntBASIC17.72■□□□□ 0.43
COMMD1Q8N668 AC241585.3-202ENST00000628937 1088 ntBASIC17.72■□□□□ 0.43
COMMD1Q8N668 AC245100.8-202ENST00000629247 1058 ntBASIC17.72■□□□□ 0.43
COMMD1Q8N668 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.72■□□□□ 0.43
COMMD1Q8N668 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD1Q8N668 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
COMMD1Q8N668 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD1Q8N668 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COMMD1Q8N668 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
COMMD1Q8N668 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COMMD1Q8N668 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms