Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC139530.1-201ENST00000575312 1977 ntBASIC20.52■□□□□ 0.87
CARFQ8N187 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.51■□□□□ 0.87
CARFQ8N187 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CARFQ8N187 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CARFQ8N187 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.51■□□□□ 0.87
CARFQ8N187 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CARFQ8N187 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.51■□□□□ 0.87
CARFQ8N187 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.51■□□□□ 0.87
CARFQ8N187 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.51■□□□□ 0.87
CARFQ8N187 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.51■□□□□ 0.87
CARFQ8N187 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.51■□□□□ 0.87
CARFQ8N187 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 BID-214ENST00000617586 542 ntTSL 5 BASIC20.51■□□□□ 0.87
CARFQ8N187 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CARFQ8N187 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.51■□□□□ 0.87
CARFQ8N187 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.51■□□□□ 0.87
CARFQ8N187 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CARFQ8N187 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARFQ8N187 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.51■□□□□ 0.87
CARFQ8N187 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
CARFQ8N187 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.5■□□□□ 0.87
CARFQ8N187 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.5■□□□□ 0.87
CARFQ8N187 AC127496.7-201ENST00000625110 1798 ntBASIC20.5■□□□□ 0.87
CARFQ8N187 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
CARFQ8N187 AC090192.1-201ENST00000517740 490 ntBASIC20.5■□□□□ 0.87
CARFQ8N187 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CARFQ8N187 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 KRT18P20-201ENST00000548986 1279 ntBASIC20.5■□□□□ 0.87
CARFQ8N187 AC138907.5-202ENST00000569484 235 ntBASIC20.5■□□□□ 0.87
CARFQ8N187 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.5■□□□□ 0.87
CARFQ8N187 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.5■□□□□ 0.87
CARFQ8N187 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CARFQ8N187 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARFQ8N187 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CARFQ8N187 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CARFQ8N187 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CARFQ8N187 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.49■□□□□ 0.87
CARFQ8N187 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.49■□□□□ 0.87
CARFQ8N187 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CARFQ8N187 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.49■□□□□ 0.87
CARFQ8N187 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CARFQ8N187 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CARFQ8N187 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.48■□□□□ 0.87
CARFQ8N187 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CARFQ8N187 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CARFQ8N187 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.48■□□□□ 0.87
CARFQ8N187 EEF1DP3-203ENST00000566025 782 ntBASIC20.48■□□□□ 0.87
CARFQ8N187 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.48■□□□□ 0.87
CARFQ8N187 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CARFQ8N187 AC053503.5-201ENST00000601508 636 ntBASIC20.48■□□□□ 0.87
CARFQ8N187 AC080038.1-201ENST00000611274 1154 ntBASIC20.48■□□□□ 0.87
CARFQ8N187 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.48■□□□□ 0.87
CARFQ8N187 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CARFQ8N187 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CARFQ8N187 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CARFQ8N187 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.47■□□□□ 0.87
CARFQ8N187 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CARFQ8N187 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CARFQ8N187 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.47■□□□□ 0.87
CARFQ8N187 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.47■□□□□ 0.87
CARFQ8N187 AC010141.2-201ENST00000452426 721 ntBASIC20.47■□□□□ 0.87
CARFQ8N187 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.47■□□□□ 0.87
CARFQ8N187 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.47■□□□□ 0.87
CARFQ8N187 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.47■□□□□ 0.87
CARFQ8N187 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 AP001160.3-201ENST00000601484 763 ntBASIC20.47■□□□□ 0.87
CARFQ8N187 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.47■□□□□ 0.87
CARFQ8N187 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.47■□□□□ 0.87
CARFQ8N187 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CARFQ8N187 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms