Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AL136116.3-201ENST00000402907 1138 ntBASIC26.78■■□□□ 1.88
SMC5Q8IY18 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC26.78■■□□□ 1.88
SMC5Q8IY18 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.78■■□□□ 1.88
SMC5Q8IY18 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.78■■□□□ 1.88
SMC5Q8IY18 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.78■■□□□ 1.88
SMC5Q8IY18 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.78■■□□□ 1.88
SMC5Q8IY18 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMC5Q8IY18 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
SMC5Q8IY18 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC26.77■■□□□ 1.88
SMC5Q8IY18 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.77■■□□□ 1.88
SMC5Q8IY18 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.77■■□□□ 1.88
SMC5Q8IY18 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SMC5Q8IY18 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.77■■□□□ 1.88
SMC5Q8IY18 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SMC5Q8IY18 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.76■■□□□ 1.88
SMC5Q8IY18 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.88
SMC5Q8IY18 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.76■■□□□ 1.88
SMC5Q8IY18 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC26.76■■□□□ 1.88
SMC5Q8IY18 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.76■■□□□ 1.87
SMC5Q8IY18 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
SMC5Q8IY18 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SMC5Q8IY18 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SMC5Q8IY18 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.75■■□□□ 1.87
SMC5Q8IY18 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 USP48-205ENST00000421625 2818 ntTSL 2 BASIC26.75■■□□□ 1.87
SMC5Q8IY18 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.75■■□□□ 1.87
SMC5Q8IY18 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.75■■□□□ 1.87
SMC5Q8IY18 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
SMC5Q8IY18 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SMC5Q8IY18 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
SMC5Q8IY18 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMC5Q8IY18 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
SMC5Q8IY18 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMC5Q8IY18 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SMC5Q8IY18 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMC5Q8IY18 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.74■■□□□ 1.87
SMC5Q8IY18 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
SMC5Q8IY18 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.74■■□□□ 1.87
SMC5Q8IY18 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SMC5Q8IY18 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
SMC5Q8IY18 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.73■■□□□ 1.87
SMC5Q8IY18 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMC5Q8IY18 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMC5Q8IY18 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.73■■□□□ 1.87
SMC5Q8IY18 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMC5Q8IY18 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SMC5Q8IY18 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.73■■□□□ 1.87
SMC5Q8IY18 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 Z98882.1-201ENST00000622160 2253 ntBASIC26.72■■□□□ 1.87
SMC5Q8IY18 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 AC133561.4-201ENST00000566112 224 ntBASIC26.72■■□□□ 1.87
SMC5Q8IY18 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC26.72■■□□□ 1.87
SMC5Q8IY18 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SMC5Q8IY18 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMC5Q8IY18 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.71■■□□□ 1.87
SMC5Q8IY18 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.71■■□□□ 1.87
SMC5Q8IY18 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SMC5Q8IY18 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMC5Q8IY18 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC26.71■■□□□ 1.87
SMC5Q8IY18 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.71■■□□□ 1.87
SMC5Q8IY18 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SMC5Q8IY18 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMC5Q8IY18 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
SMC5Q8IY18 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMC5Q8IY18 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.7■■□□□ 1.86
SMC5Q8IY18 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMC5Q8IY18 UNC93B3-201ENST00000308076 687 ntBASIC26.7■■□□□ 1.86
SMC5Q8IY18 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.7■■□□□ 1.86
SMC5Q8IY18 MIR4767-201ENST00000582827 78 ntBASIC26.7■■□□□ 1.86
SMC5Q8IY18 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.7■■□□□ 1.86
SMC5Q8IY18 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
SMC5Q8IY18 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMC5Q8IY18 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SMC5Q8IY18 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMC5Q8IY18 BX842568.3-201ENST00000418104 571 ntBASIC26.69■■□□□ 1.86
SMC5Q8IY18 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
SMC5Q8IY18 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SMC5Q8IY18 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SMC5Q8IY18 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms