Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
C9orf40Q8IXQ3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 TERF1P2-201ENST00000583350 1212 ntBASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C9orf40Q8IXQ3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 AL034346.1-201ENST00000568244 1277 ntBASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 AC005224.4-201ENST00000583262 1652 ntBASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 AC009237.3-201ENST00000393279 1427 ntBASIC19.93■□□□□ 0.78
C9orf40Q8IXQ3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C9orf40Q8IXQ3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L2-201ENST00000561772 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L6-201ENST00000626483 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L1-201ENST00000627662 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L8-201ENST00000629013 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L3-201ENST00000630187 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L7-201ENST00000630678 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4L5-201ENST00000630834 1275 ntBASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.91■□□□□ 0.78
C9orf40Q8IXQ3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 AC092053.2-201ENST00000640557 1818 ntBASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 KRT18P14-201ENST00000534205 1250 ntBASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 MIR5787-201ENST00000611784 55 ntBASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf40Q8IXQ3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms