Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 RARRES2P1-201ENST00000474487 481 ntBASIC19.41■□□□□ 0.7
SHFQ7M4L6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 CA15P2-201ENST00000611168 834 ntBASIC19.41■□□□□ 0.7
SHFQ7M4L6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SHFQ7M4L6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SHFQ7M4L6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SHFQ7M4L6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 C17orf82-201ENST00000623772 1530 ntBASIC19.4■□□□□ 0.7
SHFQ7M4L6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SHFQ7M4L6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SHFQ7M4L6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SHFQ7M4L6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHFQ7M4L6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SHFQ7M4L6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
SHFQ7M4L6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SHFQ7M4L6 TSPY9P-201ENST00000440215 945 ntBASIC19.39■□□□□ 0.69
SHFQ7M4L6 TSPY11P-201ENST00000442607 1045 ntBASIC19.39■□□□□ 0.69
SHFQ7M4L6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SHFQ7M4L6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SHFQ7M4L6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.39■□□□□ 0.69
SHFQ7M4L6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.39■□□□□ 0.69
SHFQ7M4L6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.39■□□□□ 0.69
SHFQ7M4L6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SHFQ7M4L6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SHFQ7M4L6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.38■□□□□ 0.69
SHFQ7M4L6 AC009299.2-201ENST00000482477 511 ntBASIC19.38■□□□□ 0.69
SHFQ7M4L6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.38■□□□□ 0.69
SHFQ7M4L6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SHFQ7M4L6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SHFQ7M4L6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.37■□□□□ 0.69
SHFQ7M4L6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.37■□□□□ 0.69
SHFQ7M4L6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.37■□□□□ 0.69
SHFQ7M4L6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SHFQ7M4L6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHFQ7M4L6 AL157384.1-201ENST00000445995 2473 ntBASIC19.36■□□□□ 0.69
SHFQ7M4L6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.36■□□□□ 0.69
SHFQ7M4L6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHFQ7M4L6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHFQ7M4L6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.36■□□□□ 0.69
SHFQ7M4L6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SHFQ7M4L6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHFQ7M4L6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHFQ7M4L6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.36■□□□□ 0.69
SHFQ7M4L6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHFQ7M4L6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHFQ7M4L6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SHFQ7M4L6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHFQ7M4L6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHFQ7M4L6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHFQ7M4L6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHFQ7M4L6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHFQ7M4L6 MIR6724-1-201ENST00000616420 92 ntBASIC19.35■□□□□ 0.69
SHFQ7M4L6 MIR6724-2-201ENST00000616483 92 ntBASIC19.35■□□□□ 0.69
SHFQ7M4L6 MIR6724-4-201ENST00000617390 92 ntBASIC19.35■□□□□ 0.69
SHFQ7M4L6 MIR6724-3-201ENST00000622482 92 ntBASIC19.35■□□□□ 0.69
SHFQ7M4L6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SHFQ7M4L6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms