Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHMP1BQ7LBR1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHMP1BQ7LBR1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.71■□□□□ 0.75
CHMP1BQ7LBR1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP1BQ7LBR1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP1BQ7LBR1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 MIR572-201ENST00000384983 95 ntBASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 RARRES2P6-201ENST00000567333 442 ntBASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP1BQ7LBR1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP1BQ7LBR1 AL358852.1-201ENST00000623174 1268 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms