Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 DUX4L4-201ENST00000566884 1269 ntBASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 AC010997.5-201ENST00000609182 354 ntBASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PTCHD4Q6ZW05 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCHD4Q6ZW05 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 AC073130.3-201ENST00000624389 2278 ntBASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCHD4Q6ZW05 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTCHD4Q6ZW05 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCHD4Q6ZW05 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 CA15P2-201ENST00000611168 834 ntBASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 Z98882.1-201ENST00000622160 2253 ntBASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 C17orf82-201ENST00000623772 1530 ntBASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCHD4Q6ZW05 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 UNC93B8-201ENST00000511903 705 ntBASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCHD4Q6ZW05 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCHD4Q6ZW05 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms