Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BRAT1Q6PJG6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRAT1Q6PJG6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRAT1Q6PJG6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BRAT1Q6PJG6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 AC068473.5-201ENST00000616428 2072 ntBASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.6■■□□□ 1.05
BRAT1Q6PJG6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 KRT18P5-201ENST00000436075 1291 ntBASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 AC079140.4-201ENST00000507448 529 ntBASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 AC080038.3-201ENST00000623346 1952 ntBASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 AC055733.4-201ENST00000638462 1354 ntBASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.59■■□□□ 1.05
BRAT1Q6PJG6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 AC104564.3-201ENST00000582367 638 ntBASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 NTF6G-201ENST00000591094 616 ntBASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
BRAT1Q6PJG6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRAT1Q6PJG6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
BRAT1Q6PJG6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRAT1Q6PJG6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
BRAT1Q6PJG6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
BRAT1Q6PJG6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.57■■□□□ 1.04
BRAT1Q6PJG6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BRAT1Q6PJG6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms