Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MRPL54Q6P161 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
MRPL54Q6P161 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.22■□□□□ 0.19
MRPL54Q6P161 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
MRPL54Q6P161 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.22■□□□□ 0.19
MRPL54Q6P161 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.22■□□□□ 0.19
MRPL54Q6P161 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MRPL54Q6P161 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MRPL54Q6P161 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.22■□□□□ 0.19
MRPL54Q6P161 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
MRPL54Q6P161 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.21■□□□□ 0.19
MRPL54Q6P161 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRPL54Q6P161 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MRPL54Q6P161 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL54Q6P161 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL54Q6P161 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL54Q6P161 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.21■□□□□ 0.18
MRPL54Q6P161 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 AC007029.1-201ENST00000604183 313 ntBASIC16.2■□□□□ 0.18
MRPL54Q6P161 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.2■□□□□ 0.18
MRPL54Q6P161 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL54Q6P161 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL54Q6P161 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL54Q6P161 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL54Q6P161 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
MRPL54Q6P161 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MRPL54Q6P161 LINC01960-201ENST00000563759 1884 ntBASIC16.18■□□□□ 0.18
MRPL54Q6P161 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.18■□□□□ 0.18
MRPL54Q6P161 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.18■□□□□ 0.18
MRPL54Q6P161 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL54Q6P161 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms