Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 AC087239.1-201ENST00000622671 572 ntBASIC20.07■□□□□ 0.8
REEP3Q6NUK4 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.07■□□□□ 0.8
REEP3Q6NUK4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
REEP3Q6NUK4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.06■□□□□ 0.8
REEP3Q6NUK4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.05■□□□□ 0.8
REEP3Q6NUK4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
REEP3Q6NUK4 Z98882.1-201ENST00000622160 2253 ntBASIC20.04■□□□□ 0.8
REEP3Q6NUK4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
REEP3Q6NUK4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 AL512631.2-201ENST00000604634 923 ntBASIC20.02■□□□□ 0.8
REEP3Q6NUK4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
REEP3Q6NUK4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
REEP3Q6NUK4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
REEP3Q6NUK4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.02■□□□□ 0.79
REEP3Q6NUK4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 AC010141.3-201ENST00000456659 717 ntBASIC20.01■□□□□ 0.79
REEP3Q6NUK4 AC026471.6-201ENST00000622954 1905 ntBASIC20.01■□□□□ 0.79
REEP3Q6NUK4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 AC005229.4-201ENST00000610085 2198 ntBASIC20.01■□□□□ 0.79
REEP3Q6NUK4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
REEP3Q6NUK4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20■□□□□ 0.79
REEP3Q6NUK4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20■□□□□ 0.79
REEP3Q6NUK4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 AC104564.3-201ENST00000582367 638 ntBASIC20■□□□□ 0.79
REEP3Q6NUK4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
REEP3Q6NUK4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
REEP3Q6NUK4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms