Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL6Q6ICC9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 AC137761.2-201ENST00000561729 223 ntBASIC19.41■□□□□ 0.7
RTL6Q6ICC9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 AC145350.3-201ENST00000569033 163 ntBASIC19.41■□□□□ 0.7
RTL6Q6ICC9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 AC092068.2-201ENST00000590491 1708 ntBASIC19.41■□□□□ 0.7
RTL6Q6ICC9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RTL6Q6ICC9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL6Q6ICC9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
RTL6Q6ICC9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
RTL6Q6ICC9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL6Q6ICC9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 AC080038.1-201ENST00000611274 1154 ntBASIC19.38■□□□□ 0.69
RTL6Q6ICC9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL6Q6ICC9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 ID1-201ENST00000376105 1233 ntBASIC19.37■□□□□ 0.69
RTL6Q6ICC9 AC016769.1-201ENST00000409132 1010 ntBASIC19.37■□□□□ 0.69
RTL6Q6ICC9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL6Q6ICC9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL6Q6ICC9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms