Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 AC093787.1-201ENST00000450396 207 ntBASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 AC010536.3-201ENST00000620306 533 ntBASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 MYCNOS-205ENST00000641950 531 ntBASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 AC092118.2-201ENST00000613495 667 ntBASIC14.68□□□□□ -0.06
VPS13DQ5THJ4 ANOS2P-203ENST00000472227 1816 ntBASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 TERF1P5-201ENST00000477545 1207 ntBASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 AC133552.2-202ENST00000575694 574 ntBASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC14.67□□□□□ -0.06
VPS13DQ5THJ4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 MKRN4P-201ENST00000444706 1521 ntBASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VPS13DQ5THJ4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 DUSP5P2-201ENST00000426873 1033 ntBASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 POU5F1P3-201ENST00000428824 1078 ntBASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 AC128676.1-201ENST00000454392 318 ntBASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS13DQ5THJ4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 ITM2C-210ENST00000620962 501 ntBASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.64□□□□□ -0.07
VPS13DQ5THJ4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 AC010141.2-201ENST00000452426 721 ntBASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13DQ5THJ4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms