Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RUNDC3AQ59EK9 AC133637.1-201ENST00000624115 1537 ntBASIC20.33■□□□□ 0.85
RUNDC3AQ59EK9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RUNDC3AQ59EK9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RUNDC3AQ59EK9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RUNDC3AQ59EK9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.33■□□□□ 0.84
RUNDC3AQ59EK9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.33■□□□□ 0.84
RUNDC3AQ59EK9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RUNDC3AQ59EK9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.33■□□□□ 0.84
RUNDC3AQ59EK9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 AF106564.1-201ENST00000607058 2553 ntBASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 MIR6724-1-201ENST00000616420 92 ntBASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 MIR6724-2-201ENST00000616483 92 ntBASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 MIR6724-4-201ENST00000617390 92 ntBASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 MIR6724-3-201ENST00000622482 92 ntBASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RUNDC3AQ59EK9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RUNDC3AQ59EK9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 OR7E47P-201ENST00000546390 1422 ntBASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 PKD1P6-201ENST00000343738 4769 ntBASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.3■□□□□ 0.84
RUNDC3AQ59EK9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 RARRES2P1-201ENST00000474487 481 ntBASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 pRNA.6-201ENST00000610482 90 ntBASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 pRNA.5-201ENST00000612139 90 ntBASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 pRNA.11-201ENST00000618423 90 ntBASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 pRNA.13-201ENST00000619112 90 ntBASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.29■□□□□ 0.84
RUNDC3AQ59EK9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 AC006455.2-201ENST00000429931 906 ntBASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 AC009299.2-201ENST00000482477 511 ntBASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 AC104564.3-201ENST00000582367 638 ntBASIC20.28■□□□□ 0.84
RUNDC3AQ59EK9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 UNC93B8-201ENST00000511903 705 ntBASIC20.27■□□□□ 0.84
RUNDC3AQ59EK9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms