Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM4SF20Q53R12 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 EDA-201ENST00000338901 1233 ntBASIC16.69■□□□□ 0.26
TM4SF20Q53R12 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 BX842568.3-201ENST00000418104 571 ntBASIC16.69■□□□□ 0.26
TM4SF20Q53R12 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 AC233992.3-201ENST00000607491 485 ntBASIC16.69■□□□□ 0.26
TM4SF20Q53R12 AL355001.2-201ENST00000620617 1191 ntBASIC16.69■□□□□ 0.26
TM4SF20Q53R12 AL031602.1-201ENST00000633169 911 ntBASIC16.69■□□□□ 0.26
TM4SF20Q53R12 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TM4SF20Q53R12 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM4SF20Q53R12 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 MIR638-201ENST00000385237 100 ntBASIC16.67■□□□□ 0.26
TM4SF20Q53R12 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 AC126544.1-201ENST00000580842 1059 ntBASIC16.67■□□□□ 0.26
TM4SF20Q53R12 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TM4SF20Q53R12 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 GUSBP5-202ENST00000510805 1989 ntBASIC16.66■□□□□ 0.26
TM4SF20Q53R12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 AC099791.1-201ENST00000416440 715 ntBASIC16.66■□□□□ 0.26
TM4SF20Q53R12 AP001330.3-201ENST00000520123 633 ntBASIC16.66■□□□□ 0.26
TM4SF20Q53R12 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 AF213884.3-201ENST00000563833 479 ntBASIC16.66■□□□□ 0.26
TM4SF20Q53R12 AC133561.4-201ENST00000566112 224 ntBASIC16.66■□□□□ 0.26
TM4SF20Q53R12 AC068587.7-201ENST00000641602 218 ntBASIC16.66■□□□□ 0.26
TM4SF20Q53R12 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TM4SF20Q53R12 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TM4SF20Q53R12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms