Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 SNORA78-201ENST00000459373 127 ntBASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 AC091874.3-201ENST00000512672 1195 ntBASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 KRT18P20-201ENST00000548986 1279 ntBASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 AC069236.1-201ENST00000604339 616 ntBASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.09■□□□□ 0.97
RSPO4Q2I0M5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 FAM197Y4-202ENST00000622692 608 ntBASIC21.08■□□□□ 0.97
RSPO4Q2I0M5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RSPO4Q2I0M5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RSPO4Q2I0M5 OXCT2P1-201ENST00000447263 1535 ntBASIC21.08■□□□□ 0.96
RSPO4Q2I0M5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RSPO4Q2I0M5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.06■□□□□ 0.96
RSPO4Q2I0M5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 DUSP8P4-201ENST00000399538 1761 ntBASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RSPO4Q2I0M5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 AC010141.2-201ENST00000452426 721 ntBASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 Z99916.2-201ENST00000604037 246 ntBASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.04■□□□□ 0.96
RSPO4Q2I0M5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 AC007322.4-201ENST00000509611 723 ntBASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 AC004687.1-201ENST00000579003 1625 ntBASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RSPO4Q2I0M5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RSPO4Q2I0M5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms