Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.13■□□□□ 0.49
COL10A1Q03692 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.13■□□□□ 0.49
COL10A1Q03692 AC233992.3-201ENST00000607491 485 ntBASIC18.13■□□□□ 0.49
COL10A1Q03692 AC106739.1-201ENST00000617035 715 ntBASIC18.13■□□□□ 0.49
COL10A1Q03692 AC110285.6-201ENST00000617652 491 ntBASIC18.13■□□□□ 0.49
COL10A1Q03692 SLC25A24-204ENST00000569674 2357 ntBASIC18.13■□□□□ 0.49
COL10A1Q03692 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL10A1Q03692 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL10A1Q03692 OR7E47P-201ENST00000546390 1422 ntBASIC18.13■□□□□ 0.49
COL10A1Q03692 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL10A1Q03692 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL10A1Q03692 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL10A1Q03692 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL10A1Q03692 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL10A1Q03692 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.12■□□□□ 0.49
COL10A1Q03692 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL10A1Q03692 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.12■□□□□ 0.49
COL10A1Q03692 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.12■□□□□ 0.49
COL10A1Q03692 OXCT2P1-201ENST00000447263 1535 ntBASIC18.12■□□□□ 0.49
COL10A1Q03692 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL10A1Q03692 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL10A1Q03692 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COL10A1Q03692 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COL10A1Q03692 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.11■□□□□ 0.49
COL10A1Q03692 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.11■□□□□ 0.49
COL10A1Q03692 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.11■□□□□ 0.49
COL10A1Q03692 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 AC126544.1-201ENST00000580842 1059 ntBASIC18.11■□□□□ 0.49
COL10A1Q03692 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.11■□□□□ 0.49
COL10A1Q03692 AC008764.7-201ENST00000593779 1081 ntBASIC18.11■□□□□ 0.49
COL10A1Q03692 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL10A1Q03692 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.11■□□□□ 0.49
COL10A1Q03692 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL10A1Q03692 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COL10A1Q03692 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
COL10A1Q03692 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.1■□□□□ 0.49
COL10A1Q03692 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.1■□□□□ 0.49
COL10A1Q03692 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
COL10A1Q03692 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
COL10A1Q03692 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.1■□□□□ 0.49
COL10A1Q03692 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
COL10A1Q03692 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL10A1Q03692 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL10A1Q03692 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL10A1Q03692 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.09■□□□□ 0.49
COL10A1Q03692 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.09■□□□□ 0.49
COL10A1Q03692 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL10A1Q03692 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.09■□□□□ 0.49
COL10A1Q03692 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL10A1Q03692 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL10A1Q03692 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.08■□□□□ 0.49
COL10A1Q03692 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.08■□□□□ 0.49
COL10A1Q03692 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL10A1Q03692 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
COL10A1Q03692 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL10A1Q03692 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
COL10A1Q03692 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.08■□□□□ 0.49
COL10A1Q03692 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.08■□□□□ 0.49
COL10A1Q03692 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL10A1Q03692 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.08■□□□□ 0.48
COL10A1Q03692 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL10A1Q03692 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms