Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.74■□□□□ 0.91
HMGCS1Q01581 AC026471.6-201ENST00000622954 1905 ntBASIC20.74■□□□□ 0.91
HMGCS1Q01581 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.74■□□□□ 0.91
HMGCS1Q01581 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HMGCS1Q01581 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGCS1Q01581 OR7E47P-201ENST00000546390 1422 ntBASIC20.73■□□□□ 0.91
HMGCS1Q01581 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HMGCS1Q01581 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
HMGCS1Q01581 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGCS1Q01581 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.73■□□□□ 0.91
HMGCS1Q01581 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.73■□□□□ 0.91
HMGCS1Q01581 AC068587.7-201ENST00000641602 218 ntBASIC20.73■□□□□ 0.91
HMGCS1Q01581 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.73■□□□□ 0.91
HMGCS1Q01581 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
HMGCS1Q01581 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.72■□□□□ 0.91
HMGCS1Q01581 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HMGCS1Q01581 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCS1Q01581 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCS1Q01581 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCS1Q01581 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCS1Q01581 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCS1Q01581 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HMGCS1Q01581 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.71■□□□□ 0.91
HMGCS1Q01581 AC244015.2-201ENST00000616358 1861 ntBASIC20.71■□□□□ 0.91
HMGCS1Q01581 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HMGCS1Q01581 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HMGCS1Q01581 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 AC010141.3-201ENST00000456659 717 ntBASIC20.7■□□□□ 0.9
HMGCS1Q01581 DUX4L19-201ENST00000557448 1267 ntBASIC20.7■□□□□ 0.9
HMGCS1Q01581 AL138724.1-201ENST00000606771 1088 ntBASIC20.7■□□□□ 0.9
HMGCS1Q01581 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
HMGCS1Q01581 AC087239.1-201ENST00000622671 572 ntBASIC20.7■□□□□ 0.9
HMGCS1Q01581 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.7■□□□□ 0.9
HMGCS1Q01581 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HMGCS1Q01581 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HMGCS1Q01581 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS1Q01581 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS1Q01581 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS1Q01581 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGCS1Q01581 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HMGCS1Q01581 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.69■□□□□ 0.9
HMGCS1Q01581 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.69■□□□□ 0.9
HMGCS1Q01581 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.69■□□□□ 0.9
HMGCS1Q01581 AC136469.2-201ENST00000623944 1028 ntBASIC20.69■□□□□ 0.9
HMGCS1Q01581 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.69■□□□□ 0.9
HMGCS1Q01581 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
HMGCS1Q01581 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGCS1Q01581 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGCS1Q01581 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms