Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 NHP6AYPR052C 282 nt5.19□□□□□ -1.58 RIP-Chip
UBP3Q01477 MRPL27YBR282W 441 nt5.19□□□□□ -1.58 RIP-Chip
UBP3Q01477 RIM15YFL033C 5313 nt5.19□□□□□ -1.58
UBP3Q01477 TDA7YNL176C 1911 nt5.19□□□□□ -1.58
UBP3Q01477 SAT4YCR008W 1812 nt5.18□□□□□ -1.58 RIP-Chip
UBP3Q01477 PFK1YGR240C 2964 nt5.18□□□□□ -1.58
UBP3Q01477 PLM2YDR501W 1566 nt5.18□□□□□ -1.58
UBP3Q01477 YMR102CYMR102C 2505 nt5.18□□□□□ -1.58 RIP-Chip
UBP3Q01477 UBC9YDL064W 474 nt5.18□□□□□ -1.58 RIP-Chip
UBP3Q01477 RXT3YDL076C 885 nt5.18□□□□□ -1.58
UBP3Q01477 AAD4YDL243C 990 nt5.18□□□□□ -1.58
UBP3Q01477 WBP1YEL002C 1293 nt5.18□□□□□ -1.58
UBP3Q01477 ARO2YGL148W 1131 nt5.18□□□□□ -1.58 RIP-Chip
UBP3Q01477 COX2Q0250 756 nt5.18□□□□□ -1.58
UBP3Q01477 YHR212W-AYHR212W-A 204 nt5.18□□□□□ -1.58
UBP3Q01477 YAR061WYAR061W 204 nt5.18□□□□□ -1.58
UBP3Q01477 TMC1YOR052C 453 nt5.18□□□□□ -1.58
UBP3Q01477 CLF1YLR117C 2064 nt5.18□□□□□ -1.58
UBP3Q01477 GPR1YDL035C 2886 nt5.18□□□□□ -1.58
UBP3Q01477 CET1YPL228W 1650 nt5.18□□□□□ -1.58
UBP3Q01477 UBC8YEL012W 657 nt5.17□□□□□ -1.58
UBP3Q01477 BUD25YER014C-A 462 nt5.17□□□□□ -1.58
UBP3Q01477 SLX8YER116C 825 nt5.17□□□□□ -1.58
UBP3Q01477 CIC1YHR052W 1131 nt5.17□□□□□ -1.58
UBP3Q01477 NFU1YKL040C 771 nt5.17□□□□□ -1.58
UBP3Q01477 PIR3YKL163W 978 nt5.17□□□□□ -1.58
UBP3Q01477 TRM10YOL093W 882 nt5.17□□□□□ -1.58
UBP3Q01477 RIB4YOL143C 510 nt5.17□□□□□ -1.58
UBP3Q01477 TOA1YOR194C 861 nt5.17□□□□□ -1.58
UBP3Q01477 VPS30YPL120W 1674 nt5.17□□□□□ -1.58
UBP3Q01477 MET17YLR303W 1335 nt5.17□□□□□ -1.58
UBP3Q01477 STE7YDL159W 1548 nt5.17□□□□□ -1.58 RIP-Chip
UBP3Q01477 AIM14YGL160W 1713 nt5.17□□□□□ -1.58
UBP3Q01477 FAR10YLR238W 1437 nt5.16□□□□□ -1.58
UBP3Q01477 NOP8YOL144W 1455 nt5.16□□□□□ -1.58
UBP3Q01477 YDR248CYDR248C 582 nt5.16□□□□□ -1.58
UBP3Q01477 RSM18YER050C 417 nt5.16□□□□□ -1.58
UBP3Q01477 TIM10YHR005C-A 282 nt5.16□□□□□ -1.58
UBP3Q01477 YPT35YHR105W 645 nt5.16□□□□□ -1.58
UBP3Q01477 NIS1YNL078W 1224 nt5.16□□□□□ -1.58
UBP3Q01477 PDR10YOR328W 4695 nt5.16□□□□□ -1.58
UBP3Q01477 PRM3YPL192C 402 nt5.16□□□□□ -1.58
UBP3Q01477 MCM16YPR046W 546 nt5.16□□□□□ -1.58
UBP3Q01477 UBX7YBR273C 1311 nt5.16□□□□□ -1.58
UBP3Q01477 GCN20YFR009W 2259 nt5.16□□□□□ -1.58
UBP3Q01477 TAF12YDR145W 1620 nt5.15□□□□□ -1.58
UBP3Q01477 RAD16YBR114W 2373 nt5.15□□□□□ -1.58
UBP3Q01477 DSS1YMR287C 2910 nt5.15□□□□□ -1.58
UBP3Q01477 RCR2YDR003W 633 nt5.15□□□□□ -1.59
UBP3Q01477 YFL051CYFL051C 483 nt5.15□□□□□ -1.59
UBP3Q01477 LYS5YGL154C 819 nt5.15□□□□□ -1.59 RIP-Chip
UBP3Q01477 YGR160WYGR160W 612 nt5.15□□□□□ -1.59
UBP3Q01477 VMA5YKL080W 1179 nt5.15□□□□□ -1.59
UBP3Q01477 ECI1YLR284C 843 nt5.15□□□□□ -1.59
UBP3Q01477 CAF20YOR276W 486 nt5.15□□□□□ -1.59
UBP3Q01477 ALR2YFL050C 2577 nt5.15□□□□□ -1.59
UBP3Q01477 DOA1YKL213C 2148 nt5.15□□□□□ -1.59 RIP-Chip
UBP3Q01477 YDR355CYDR355C 303 nt5.14□□□□□ -1.59
UBP3Q01477 YGR153WYGR153W 654 nt5.14□□□□□ -1.59 RIP-Chip
UBP3Q01477 RNR2YJL026W 1200 nt5.14□□□□□ -1.59
UBP3Q01477 YKL023WYKL023W 834 nt5.14□□□□□ -1.59 RIP-Chip
UBP3Q01477 YAL065CYAL065C 387 nt5.14□□□□□ -1.59
UBP3Q01477 RPS30AYLR287C-A 192 nt5.14□□□□□ -1.59 RIP-Chip
UBP3Q01477 MED11YMR112C 396 nt5.14□□□□□ -1.59
UBP3Q01477 YOL029CYOL029C 606 nt5.14□□□□□ -1.59 RIP-Chip
UBP3Q01477 YGK3YOL128C 1128 nt5.14□□□□□ -1.59 RIP-Chip
UBP3Q01477 SPR2YOR214C 711 nt5.14□□□□□ -1.59
UBP3Q01477 HRK1YOR267C 2280 nt5.14□□□□□ -1.59 RIP-Chip
UBP3Q01477 OPT2YPR194C 2634 nt5.14□□□□□ -1.59
UBP3Q01477 AEP3YPL005W 1821 nt5.13□□□□□ -1.59
UBP3Q01477 HRR25YPL204W 1485 nt5.13□□□□□ -1.59 RIP-Chip
UBP3Q01477 KEI1YDR367W 666 nt5.13□□□□□ -1.59
UBP3Q01477 GLC7YER133W 939 nt5.13□□□□□ -1.59
UBP3Q01477 YER158W-AYER158W-A 216 nt5.13□□□□□ -1.59
UBP3Q01477 YGL242CYGL242C 546 nt5.13□□□□□ -1.59
UBP3Q01477 YGR114CYGR114C 390 nt5.13□□□□□ -1.59
UBP3Q01477 THP2YHR167W 786 nt5.13□□□□□ -1.59
UBP3Q01477 LOH1YJL038C 660 nt5.13□□□□□ -1.59
UBP3Q01477 AHP1YLR109W 531 nt5.13□□□□□ -1.59
UBP3Q01477 FEX1YOR390W 1128 nt5.13□□□□□ -1.59 RIP-Chip
UBP3Q01477 YPL034WYPL034W 498 nt5.13□□□□□ -1.59
UBP3Q01477 YAR1YPL239W 603 nt5.13□□□□□ -1.59
UBP3Q01477 FEX2YPL279C 1128 nt5.13□□□□□ -1.59
UBP3Q01477 MRPL51YPR100W 423 nt5.13□□□□□ -1.59
UBP3Q01477 GMC1YDR506C 1827 nt5.13□□□□□ -1.59
UBP3Q01477 TPD3YAL016W 1908 nt5.13□□□□□ -1.59 RIP-Chip
UBP3Q01477 CAF4YKR036C 1932 nt5.13□□□□□ -1.59 RIP-Chip
UBP3Q01477 BUD22YMR014W 1560 nt5.12□□□□□ -1.59
UBP3Q01477 GIP4YAL031C 2283 nt5.12□□□□□ -1.59
UBP3Q01477 FAP1YNL023C 2898 nt5.12□□□□□ -1.59
UBP3Q01477 MSN4YKL062W 1893 nt5.12□□□□□ -1.59 RIP-Chip
UBP3Q01477 MND1YGL183C 660 nt5.12□□□□□ -1.59
UBP3Q01477 YHR180WYHR180W 492 nt5.12□□□□□ -1.59
UBP3Q01477 GCD14YJL125C 1152 nt5.12□□□□□ -1.59
UBP3Q01477 GIM3YNL153C 390 nt5.12□□□□□ -1.59
UBP3Q01477 YNL296WYNL296W 315 nt5.12□□□□□ -1.59
UBP3Q01477 NAM2YLR382C 2685 nt5.12□□□□□ -1.59
UBP3Q01477 DNF2YDR093W 4839 nt5.11□□□□□ -1.59
UBP3Q01477 THS1YIL078W 2205 nt5.11□□□□□ -1.59
UBP3Q01477 snR84snR84 550 nt5.11□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 25.7 ms