Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 AC104564.3-201ENST00000582367 638 ntBASIC17.72■□□□□ 0.43
SRPXP78539 MIR6722-201ENST00000617286 78 ntBASIC17.72■□□□□ 0.43
SRPXP78539 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.72■□□□□ 0.43
SRPXP78539 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.72■□□□□ 0.43
SRPXP78539 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SRPXP78539 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.72■□□□□ 0.43
SRPXP78539 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.72■□□□□ 0.43
SRPXP78539 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SRPXP78539 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SRPXP78539 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SRPXP78539 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRPXP78539 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRPXP78539 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
SRPXP78539 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRPXP78539 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.71■□□□□ 0.43
SRPXP78539 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SRPXP78539 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.71■□□□□ 0.43
SRPXP78539 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SRPXP78539 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRPXP78539 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SRPXP78539 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.71■□□□□ 0.43
SRPXP78539 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SRPXP78539 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.71■□□□□ 0.42
SRPXP78539 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
SRPXP78539 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SRPXP78539 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SRPXP78539 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.7■□□□□ 0.42
SRPXP78539 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.7■□□□□ 0.42
SRPXP78539 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SRPXP78539 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.7■□□□□ 0.42
SRPXP78539 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRPXP78539 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.69■□□□□ 0.42
SRPXP78539 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SRPXP78539 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.69■□□□□ 0.42
SRPXP78539 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRPXP78539 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SRPXP78539 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.68■□□□□ 0.42
SRPXP78539 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SRPXP78539 OXCT2P1-201ENST00000447263 1535 ntBASIC17.68■□□□□ 0.42
SRPXP78539 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPXP78539 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRPXP78539 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPXP78539 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.68■□□□□ 0.42
SRPXP78539 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPXP78539 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.68■□□□□ 0.42
SRPXP78539 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPXP78539 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPXP78539 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRPXP78539 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SRPXP78539 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SRPXP78539 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.67■□□□□ 0.42
SRPXP78539 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.67■□□□□ 0.42
SRPXP78539 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.67■□□□□ 0.42
SRPXP78539 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.67■□□□□ 0.42
SRPXP78539 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.67■□□□□ 0.42
SRPXP78539 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRPXP78539 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.67■□□□□ 0.42
SRPXP78539 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SRPXP78539 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SRPXP78539 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRPXP78539 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SRPXP78539 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.66■□□□□ 0.42
SRPXP78539 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms