Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB5BP61020 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB5BP61020 AFG3L1P-217ENST00000557444 2447 ntBASIC16.91■□□□□ 0.3
RAB5BP61020 FEM1AP1-201ENST00000431297 1995 ntBASIC16.91■□□□□ 0.3
RAB5BP61020 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB5BP61020 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 AC108673.1-201ENST00000510422 1159 ntBASIC16.91■□□□□ 0.3
RAB5BP61020 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB5BP61020 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB5BP61020 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB5BP61020 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5BP61020 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RAB5BP61020 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5BP61020 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5BP61020 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB5BP61020 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB5BP61020 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB5BP61020 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB5BP61020 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB5BP61020 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB5BP61020 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RAB5BP61020 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAB5BP61020 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RAB5BP61020 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
RAB5BP61020 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5BP61020 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 SMG8-203ENST00000578922 2178 ntBASIC16.88■□□□□ 0.29
RAB5BP61020 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.88■□□□□ 0.29
RAB5BP61020 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB5BP61020 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB5BP61020 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5BP61020 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAB5BP61020 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB5BP61020 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB5BP61020 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB5BP61020 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB5BP61020 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB5BP61020 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RAB5BP61020 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB5BP61020 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB5BP61020 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5BP61020 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms