Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC11.58□□□□□ -0.56
SEC61BP60468 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC11.58□□□□□ -0.56
SEC61BP60468 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC11.58□□□□□ -0.56
SEC61BP60468 KRT18P61-201ENST00000585825 1298 ntBASIC11.58□□□□□ -0.56
SEC61BP60468 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 AC104187.1-201ENST00000607510 612 ntBASIC11.58□□□□□ -0.56
SEC61BP60468 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 DUSP8P3-201ENST00000399571 1760 ntBASIC11.58□□□□□ -0.56
SEC61BP60468 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
SEC61BP60468 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC11.58□□□□□ -0.56
SEC61BP60468 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SEC61BP60468 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SEC61BP60468 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SEC61BP60468 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SEC61BP60468 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 MFF-207ENST00000409565 1548 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.57□□□□□ -0.56
SEC61BP60468 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 PARP1-202ENST00000366792 553 ntTSL 3 BASIC11.57□□□□□ -0.56
SEC61BP60468 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 MIR663A-201ENST00000385250 93 ntBASIC11.57□□□□□ -0.56
SEC61BP60468 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 AL355802.2-201ENST00000402069 882 ntBASIC11.57□□□□□ -0.56
SEC61BP60468 AC007322.1-201ENST00000426983 750 ntBASIC11.57□□□□□ -0.56
SEC61BP60468 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 AC104771.1-201ENST00000603335 964 ntBASIC11.57□□□□□ -0.56
SEC61BP60468 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC11.57□□□□□ -0.56
SEC61BP60468 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
SEC61BP60468 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
SEC61BP60468 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11.57□□□□□ -0.56
SEC61BP60468 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SEC61BP60468 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.56□□□□□ -0.56
SEC61BP60468 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC11.56□□□□□ -0.56
SEC61BP60468 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SEC61BP60468 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC11.56□□□□□ -0.56
SEC61BP60468 NCF1B-203ENST00000435988 1254 ntBASIC11.56□□□□□ -0.56
SEC61BP60468 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC11.56□□□□□ -0.56
SEC61BP60468 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC11.56□□□□□ -0.56
SEC61BP60468 AC079089.2-201ENST00000531211 1277 ntBASIC11.56□□□□□ -0.56
SEC61BP60468 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.56□□□□□ -0.56
SEC61BP60468 ABCB10P4-201ENST00000566803 2184 ntBASIC11.56□□□□□ -0.56
SEC61BP60468 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.56□□□□□ -0.56
SEC61BP60468 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
SEC61BP60468 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SEC61BP60468 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SEC61BP60468 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SEC61BP60468 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC11.56□□□□□ -0.56
SEC61BP60468 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC11.56□□□□□ -0.56
SEC61BP60468 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SEC61BP60468 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC11.55□□□□□ -0.56
SEC61BP60468 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SEC61BP60468 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SEC61BP60468 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SEC61BP60468 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SEC61BP60468 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SEC61BP60468 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SEC61BP60468 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SEC61BP60468 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SEC61BP60468 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SEC61BP60468 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SEC61BP60468 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC11.55□□□□□ -0.56
SEC61BP60468 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SEC61BP60468 SLC29A4P1-201ENST00000398760 971 ntBASIC11.55□□□□□ -0.56
SEC61BP60468 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC11.55□□□□□ -0.56
SEC61BP60468 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.55□□□□□ -0.56
SEC61BP60468 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC11.55□□□□□ -0.56
SEC61BP60468 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms