Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN2P51788 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCN2P51788 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.77■□□□□ 0.91
CLCN2P51788 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.77■□□□□ 0.91
CLCN2P51788 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLCN2P51788 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 LINC01529-204ENST00000636474 1715 ntBASIC20.76■□□□□ 0.91
CLCN2P51788 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.76■□□□□ 0.91
CLCN2P51788 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLCN2P51788 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.76■□□□□ 0.91
CLCN2P51788 DUX4L4-201ENST00000566884 1269 ntBASIC20.76■□□□□ 0.91
CLCN2P51788 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.76■□□□□ 0.91
CLCN2P51788 AL355001.2-201ENST00000620617 1191 ntBASIC20.76■□□□□ 0.91
CLCN2P51788 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.76■□□□□ 0.91
CLCN2P51788 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLCN2P51788 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN2P51788 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CLCN2P51788 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN2P51788 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLCN2P51788 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CLCN2P51788 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLCN2P51788 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN2P51788 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.75■□□□□ 0.91
CLCN2P51788 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
CLCN2P51788 MIR4767-201ENST00000582827 78 ntBASIC20.75■□□□□ 0.91
CLCN2P51788 AC136469.2-201ENST00000623944 1028 ntBASIC20.75■□□□□ 0.91
CLCN2P51788 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN2P51788 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN2P51788 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN2P51788 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLCN2P51788 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CLCN2P51788 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN2P51788 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CLCN2P51788 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.74■□□□□ 0.91
CLCN2P51788 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN2P51788 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN2P51788 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.74■□□□□ 0.91
CLCN2P51788 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLCN2P51788 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN2P51788 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN2P51788 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.74■□□□□ 0.91
CLCN2P51788 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLCN2P51788 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.74■□□□□ 0.91
CLCN2P51788 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLCN2P51788 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CLCN2P51788 AC142381.2-201ENST00000566120 298 ntBASIC20.74■□□□□ 0.91
CLCN2P51788 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.74■□□□□ 0.91
CLCN2P51788 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN2P51788 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLCN2P51788 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLCN2P51788 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CLCN2P51788 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN2P51788 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN2P51788 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN2P51788 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CLCN2P51788 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.73■□□□□ 0.91
CLCN2P51788 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN2P51788 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.73■□□□□ 0.91
CLCN2P51788 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN2P51788 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN2P51788 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN2P51788 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.73■□□□□ 0.91
CLCN2P51788 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CLCN2P51788 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLCN2P51788 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLCN2P51788 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLCN2P51788 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLCN2P51788 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.72■□□□□ 0.91
CLCN2P51788 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CLCN2P51788 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLCN2P51788 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
CLCN2P51788 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLCN2P51788 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CLCN2P51788 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN2P51788 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCN2P51788 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.71■□□□□ 0.91
CLCN2P51788 AL031432.3-201ENST00000607698 485 ntBASIC20.71■□□□□ 0.91
CLCN2P51788 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN2P51788 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN2P51788 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.71■□□□□ 0.91
CLCN2P51788 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLCN2P51788 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.71■□□□□ 0.91
CLCN2P51788 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms