Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TERT-206ENST00000508104 2486 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 LINC01960-201ENST00000563759 1884 ntBASIC13.6□□□□□ -0.23
UBE2AP49459 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBE2AP49459 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.6□□□□□ -0.23
UBE2AP49459 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
UBE2AP49459 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2AP49459 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 LINC00565-201ENST00000562710 2331 ntBASIC13.59□□□□□ -0.23
UBE2AP49459 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 ECEL1P1-201ENST00000373592 1742 ntBASIC13.59□□□□□ -0.23
UBE2AP49459 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UBE2AP49459 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC13.59□□□□□ -0.23
UBE2AP49459 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.59□□□□□ -0.23
UBE2AP49459 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UBE2AP49459 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UBE2AP49459 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBE2AP49459 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2AP49459 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC13.58□□□□□ -0.23
UBE2AP49459 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2AP49459 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2AP49459 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2AP49459 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBE2AP49459 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBE2AP49459 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
UBE2AP49459 SRD5A1P1-201ENST00000442297 786 ntBASIC13.58□□□□□ -0.24
UBE2AP49459 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.58□□□□□ -0.24
UBE2AP49459 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.58□□□□□ -0.24
UBE2AP49459 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBE2AP49459 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.57□□□□□ -0.24
UBE2AP49459 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.57□□□□□ -0.24
UBE2AP49459 AC092171.4-201ENST00000609130 632 ntBASIC13.57□□□□□ -0.24
UBE2AP49459 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBE2AP49459 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
UBE2AP49459 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
UBE2AP49459 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms