Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RPL13AP40429 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.89□□□□□ -0.03
RPL13AP40429 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL13AP40429 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
RPL13AP40429 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
RPL13AP40429 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.88□□□□□ -0.03
RPL13AP40429 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 AC092053.2-201ENST00000640557 1818 ntBASIC14.88□□□□□ -0.03
RPL13AP40429 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 PALM-208ENST00000592155 2272 ntTSL 4 BASIC14.88□□□□□ -0.03
RPL13AP40429 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.88□□□□□ -0.03
RPL13AP40429 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RPL13AP40429 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RPL13AP40429 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RPL13AP40429 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 RARRES2P2-201ENST00000394842 485 ntBASIC14.87□□□□□ -0.03
RPL13AP40429 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.87□□□□□ -0.03
RPL13AP40429 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC14.87□□□□□ -0.03
RPL13AP40429 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.87□□□□□ -0.03
RPL13AP40429 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
RPL13AP40429 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RPL13AP40429 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.86□□□□□ -0.03
RPL13AP40429 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL13AP40429 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 AC007952.6-201ENST00000573168 2673 ntBASIC14.86□□□□□ -0.03
RPL13AP40429 AC003957.1-201ENST00000625108 2673 ntBASIC14.86□□□□□ -0.03
RPL13AP40429 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.86□□□□□ -0.03
RPL13AP40429 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RPL13AP40429 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPL13AP40429 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC14.86□□□□□ -0.03
RPL13AP40429 AL391422.3-201ENST00000603791 2761 ntBASIC14.86□□□□□ -0.03
RPL13AP40429 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL13AP40429 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPL13AP40429 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL13AP40429 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPL13AP40429 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL13AP40429 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPL13AP40429 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.85□□□□□ -0.03
RPL13AP40429 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL13AP40429 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RPL13AP40429 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL13AP40429 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.85□□□□□ -0.03
RPL13AP40429 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL13AP40429 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL13AP40429 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.85□□□□□ -0.03
RPL13AP40429 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPL13AP40429 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC14.84□□□□□ -0.03
RPL13AP40429 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPL13AP40429 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.84□□□□□ -0.03
RPL13AP40429 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL13AP40429 ABHD17AP5-201ENST00000580133 923 ntBASIC14.84□□□□□ -0.03
RPL13AP40429 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms