Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 SHE10YGL228W 1734 nt4.9□□□□□ -1.62
PUB1P32588 NRD1YNL251C 1728 nt4.9□□□□□ -1.62 RIP-Chip
PUB1P32588 YCR047W-AYCR047W-A 207 nt4.9□□□□□ -1.63
PUB1P32588 GCS1YDL226C 1059 nt4.9□□□□□ -1.63
PUB1P32588 YFL051CYFL051C 483 nt4.9□□□□□ -1.63
PUB1P32588 TAM41YGR046W 1158 nt4.9□□□□□ -1.63 RIP-Chip
PUB1P32588 PAN6YIL145C 930 nt4.9□□□□□ -1.63 RIP-Chip
PUB1P32588 YJR020WYJR020W 333 nt4.9□□□□□ -1.63
PUB1P32588 YBL008W-AYBL008W-A 240 nt4.9□□□□□ -1.63
PUB1P32588 YNL019CYNL019C 855 nt4.9□□□□□ -1.63
PUB1P32588 YNL033WYNL033W 855 nt4.9□□□□□ -1.63
PUB1P32588 YNL035CYNL035C 1170 nt4.9□□□□□ -1.63 RIP-Chip
PUB1P32588 MDG1YNL173C 1101 nt4.9□□□□□ -1.63
PUB1P32588 PHO80YOL001W 882 nt4.9□□□□□ -1.63 RIP-Chip
PUB1P32588 ZRC1YMR243C 1329 nt4.9□□□□□ -1.63 RIP-Chip
PUB1P32588 ERG11YHR007C 1593 nt4.9□□□□□ -1.63 RIP-Chip
PUB1P32588 DPH2YKL191W 1605 nt4.9□□□□□ -1.63
PUB1P32588 TRE2YOR256C 2430 nt4.89□□□□□ -1.63
PUB1P32588 STE13YOR219C 2796 nt4.89□□□□□ -1.63
PUB1P32588 YDR444WYDR444W 2064 nt4.89□□□□□ -1.63
PUB1P32588 NOP56YLR197W 1515 nt4.89□□□□□ -1.63
PUB1P32588 YDL163WYDL163W 303 nt4.89□□□□□ -1.63
PUB1P32588 UBC1YDR177W 648 nt4.89□□□□□ -1.63
PUB1P32588 PRM8YGL053W 714 nt4.89□□□□□ -1.63
PUB1P32588 RPL9AYGL147C 576 nt4.89□□□□□ -1.63
PUB1P32588 YHL002C-AYHL002C-A 489 nt4.89□□□□□ -1.63
PUB1P32588 EFM4YIL064W 774 nt4.89□□□□□ -1.63
PUB1P32588 MCR1YKL150W 909 nt4.89□□□□□ -1.63
PUB1P32588 IMP2YMR035W 534 nt4.89□□□□□ -1.63 RIP-Chip
PUB1P32588 YMR135W-AYMR135W-A 534 nt4.89□□□□□ -1.63
PUB1P32588 TIF11YMR260C 462 nt4.89□□□□□ -1.63 RIP-Chip
PUB1P32588 UBC4YBR082C 447 nt4.89□□□□□ -1.63
PUB1P32588 PSY4YBL046W 1326 nt4.89□□□□□ -1.63
PUB1P32588 DED81YHR019C 1665 nt4.89□□□□□ -1.63
PUB1P32588 AEP1YMR064W 1557 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 YMR155WYMR155W 1644 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 ALG6YOR002W 1635 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 YCL076WYCL076W 744 nt4.88□□□□□ -1.63
PUB1P32588 YER034WYER034W 558 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 YGL015CYGL015C 393 nt4.88□□□□□ -1.63
PUB1P32588 LAG1YHL003C 1236 nt4.88□□□□□ -1.63
PUB1P32588 CFD1YIL003W 882 nt4.88□□□□□ -1.63
PUB1P32588 YJR111CYJR111C 852 nt4.88□□□□□ -1.63
PUB1P32588 YMR141CYMR141C 309 nt4.88□□□□□ -1.63
PUB1P32588 TPM1YNL079C 600 nt4.88□□□□□ -1.63
PUB1P32588 RIO2YNL207W 1278 nt4.88□□□□□ -1.63
PUB1P32588 MSN1YOL116W 1149 nt4.88□□□□□ -1.63
PUB1P32588 YOL160WYOL160W 342 nt4.88□□□□□ -1.63
PUB1P32588 TPK2YPL203W 1143 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 RPL19AYBR084C-A 570 nt4.88□□□□□ -1.63
PUB1P32588 snR3snR3 194 nt4.88□□□□□ -1.63
PUB1P32588 YCL012CYCL012C 405 nt4.88□□□□□ -1.63
PUB1P32588 ADF1YCL058W-A 342 nt4.88□□□□□ -1.63
PUB1P32588 SSY5YJL156C 2100 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 PUF3YLL013C 2640 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 SAS10YDL153C 1833 nt4.88□□□□□ -1.63
PUB1P32588 QRI1YDL103C 1434 nt4.88□□□□□ -1.63
PUB1P32588 MSL5YLR116W 1431 nt4.88□□□□□ -1.63 RIP-Chip
PUB1P32588 PER1YCR044C 1074 nt4.87□□□□□ -1.63 RIP-Chip
PUB1P32588 FAD1YDL045C 921 nt4.87□□□□□ -1.63
PUB1P32588 YDR396WYDR396W 501 nt4.87□□□□□ -1.63
PUB1P32588 YDR491CYDR491C 492 nt4.87□□□□□ -1.63
PUB1P32588 YGL006W-AYGL006W-A 111 nt4.87□□□□□ -1.63
PUB1P32588 ECL1YGR146C 636 nt4.87□□□□□ -1.63
PUB1P32588 DFG10YIL049W 762 nt4.87□□□□□ -1.63 RIP-Chip
PUB1P32588 ENT3YJR125C 1227 nt4.87□□□□□ -1.63
PUB1P32588 RPL17AYKL180W 555 nt4.87□□□□□ -1.63
PUB1P32588 SPG4YMR107W 348 nt4.87□□□□□ -1.63
PUB1P32588 YMR310CYMR310C 954 nt4.87□□□□□ -1.63 RIP-Chip
PUB1P32588 RLP7YNL002C 969 nt4.87□□□□□ -1.63
PUB1P32588 RPA43YOR340C 981 nt4.87□□□□□ -1.63
PUB1P32588 YOR392WYOR392W 444 nt4.87□□□□□ -1.63
PUB1P32588 MDM34YGL219C 1380 nt4.87□□□□□ -1.63
PUB1P32588 TRM12YML005W 1389 nt4.87□□□□□ -1.63
PUB1P32588 RSC30YHR056C 2652 nt4.87□□□□□ -1.63 RIP-Chip
PUB1P32588 GEP3YOR205C 1671 nt4.86□□□□□ -1.63
PUB1P32588 DSE1YER124C 1722 nt4.86□□□□□ -1.63
PUB1P32588 MDH3YDL078C 1032 nt4.86□□□□□ -1.63
PUB1P32588 YDL152WYDL152W 366 nt4.86□□□□□ -1.63
PUB1P32588 RSM24YDR175C 960 nt4.86□□□□□ -1.63
PUB1P32588 MRPL9YGR220C 810 nt4.86□□□□□ -1.63
PUB1P32588 SOL4YGR248W 768 nt4.86□□□□□ -1.63
PUB1P32588 SPC1YJR010C-A 285 nt4.86□□□□□ -1.63 RIP-Chip
PUB1P32588 DCS1YLR270W 1053 nt4.86□□□□□ -1.63
PUB1P32588 MOH1YBL049W 417 nt4.86□□□□□ -1.63
PUB1P32588 PBI2YNL015W 228 nt4.86□□□□□ -1.63 RIP-Chip
PUB1P32588 CIT1YNR001C 1440 nt4.86□□□□□ -1.63
PUB1P32588 RAD28YDR030C 1521 nt4.86□□□□□ -1.63
PUB1P32588 QDR1YIL120W 1692 nt4.86□□□□□ -1.63
PUB1P32588 snR65snR65 100 nt4.85□□□□□ -1.63
PUB1P32588 YDR154CYDR154C 351 nt4.85□□□□□ -1.63
PUB1P32588 YER135CYER135C 393 nt4.85□□□□□ -1.63
PUB1P32588 YHL037CYHL037C 402 nt4.85□□□□□ -1.63
PUB1P32588 YET1YKL065C 621 nt4.85□□□□□ -1.63 RIP-Chip
PUB1P32588 SEC13YLR208W 894 nt4.85□□□□□ -1.63
PUB1P32588 YNL205CYNL205C 423 nt4.85□□□□□ -1.63
PUB1P32588 RTT109YLL002W 1311 nt4.85□□□□□ -1.63
PUB1P32588 SSE2YBR169C 2082 nt4.85□□□□□ -1.63
PUB1P32588 SYG1YIL047C 2709 nt4.85□□□□□ -1.63
PUB1P32588 ROG3YFR022W 2202 nt4.84□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms