Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC1P29353 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHC1P29353 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC1P29353 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHC1P29353 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SHC1P29353 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SHC1P29353 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.7■□□□□ 0.74
SHC1P29353 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.7■□□□□ 0.74
SHC1P29353 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC1P29353 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC1P29353 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SHC1P29353 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHC1P29353 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC1P29353 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC1P29353 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC1P29353 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHC1P29353 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SHC1P29353 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.69■□□□□ 0.74
SHC1P29353 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHC1P29353 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SHC1P29353 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.69■□□□□ 0.74
SHC1P29353 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SHC1P29353 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC1P29353 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC1P29353 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.68■□□□□ 0.74
SHC1P29353 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SHC1P29353 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.68■□□□□ 0.74
SHC1P29353 AC105265.2-201ENST00000467189 838 ntBASIC19.68■□□□□ 0.74
SHC1P29353 AP005435.1-201ENST00000529293 1178 ntBASIC19.68■□□□□ 0.74
SHC1P29353 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC1P29353 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.68■□□□□ 0.74
SHC1P29353 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SHC1P29353 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SHC1P29353 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHC1P29353 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SHC1P29353 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SHC1P29353 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.67■□□□□ 0.74
SHC1P29353 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC1P29353 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.67■□□□□ 0.74
SHC1P29353 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SHC1P29353 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC1P29353 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.67■□□□□ 0.74
SHC1P29353 TSPY26P-201ENST00000476365 1326 ntBASIC19.67■□□□□ 0.74
SHC1P29353 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHC1P29353 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SHC1P29353 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SHC1P29353 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.66■□□□□ 0.74
SHC1P29353 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.66■□□□□ 0.74
SHC1P29353 IGHV3-19-201ENST00000521488 291 ntBASIC19.66■□□□□ 0.74
SHC1P29353 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.66■□□□□ 0.74
SHC1P29353 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.66■□□□□ 0.74
SHC1P29353 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 AC139530.1-201ENST00000575312 1977 ntBASIC19.66■□□□□ 0.74
SHC1P29353 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.66■□□□□ 0.74
SHC1P29353 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SHC1P29353 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SHC1P29353 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHC1P29353 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SHC1P29353 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC1P29353 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC1P29353 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC1P29353 ZNRF2P3-201ENST00000424200 374 ntBASIC19.65■□□□□ 0.74
SHC1P29353 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.65■□□□□ 0.74
SHC1P29353 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC1P29353 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHC1P29353 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SHC1P29353 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHC1P29353 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SHC1P29353 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.64■□□□□ 0.73
SHC1P29353 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.64■□□□□ 0.73
SHC1P29353 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SHC1P29353 AC019069.1-201ENST00000610008 1333 ntBASIC19.64■□□□□ 0.73
SHC1P29353 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHC1P29353 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.64■□□□□ 0.73
SHC1P29353 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SHC1P29353 C11orf96-202ENST00000528572 1834 ntBASIC19.64■□□□□ 0.73
SHC1P29353 AC092053.2-201ENST00000640557 1818 ntBASIC19.64■□□□□ 0.73
SHC1P29353 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms