Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.93■□□□□ 0.94
EPHA3P29320 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EPHA3P29320 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.93■□□□□ 0.94
EPHA3P29320 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.93■□□□□ 0.94
EPHA3P29320 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.93■□□□□ 0.94
EPHA3P29320 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
EPHA3P29320 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
EPHA3P29320 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EPHA3P29320 AL157384.1-201ENST00000445995 2473 ntBASIC20.93■□□□□ 0.94
EPHA3P29320 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.92■□□□□ 0.94
EPHA3P29320 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
EPHA3P29320 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.92■□□□□ 0.94
EPHA3P29320 AL499627.2-201ENST00000606283 725 ntBASIC20.92■□□□□ 0.94
EPHA3P29320 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
EPHA3P29320 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EPHA3P29320 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
EPHA3P29320 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA3P29320 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
EPHA3P29320 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EPHA3P29320 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA3P29320 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA3P29320 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
EPHA3P29320 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
EPHA3P29320 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA3P29320 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EPHA3P29320 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
EPHA3P29320 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
EPHA3P29320 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
EPHA3P29320 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.9■□□□□ 0.94
EPHA3P29320 MTDHP2-201ENST00000601468 714 ntBASIC20.9■□□□□ 0.94
EPHA3P29320 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHA3P29320 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHA3P29320 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHA3P29320 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.9■□□□□ 0.94
EPHA3P29320 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EPHA3P29320 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EPHA3P29320 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EPHA3P29320 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
EPHA3P29320 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
EPHA3P29320 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.89■□□□□ 0.94
EPHA3P29320 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EPHA3P29320 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA3P29320 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.89■□□□□ 0.93
EPHA3P29320 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA3P29320 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA3P29320 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA3P29320 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EPHA3P29320 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA3P29320 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
EPHA3P29320 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA3P29320 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.88■□□□□ 0.93
EPHA3P29320 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA3P29320 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.88■□□□□ 0.93
EPHA3P29320 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
EPHA3P29320 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA3P29320 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA3P29320 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
EPHA3P29320 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
EPHA3P29320 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
EPHA3P29320 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EPHA3P29320 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.87■□□□□ 0.93
EPHA3P29320 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 KRT125P-201ENST00000546827 989 ntBASIC20.87■□□□□ 0.93
EPHA3P29320 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.87■□□□□ 0.93
EPHA3P29320 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EPHA3P29320 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA3P29320 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA3P29320 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA3P29320 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.86■□□□□ 0.93
EPHA3P29320 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
EPHA3P29320 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.86■□□□□ 0.93
EPHA3P29320 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA3P29320 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
EPHA3P29320 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EPHA3P29320 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms