Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AP004607.7-201ENST00000527152 1677 ntBASIC19.87■□□□□ 0.77
ABCD3P28288 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ABCD3P28288 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ABCD3P28288 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ABCD3P28288 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ABCD3P28288 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
ABCD3P28288 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCD3P28288 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCD3P28288 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCD3P28288 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ABCD3P28288 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.86■□□□□ 0.77
ABCD3P28288 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ABCD3P28288 YBX1P1-201ENST00000445822 960 ntBASIC19.86■□□□□ 0.77
ABCD3P28288 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCD3P28288 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.86■□□□□ 0.77
ABCD3P28288 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ABCD3P28288 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.85■□□□□ 0.77
ABCD3P28288 AL117328.2-201ENST00000624617 1940 ntBASIC19.85■□□□□ 0.77
ABCD3P28288 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.85■□□□□ 0.77
ABCD3P28288 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCD3P28288 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCD3P28288 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
ABCD3P28288 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 AL034346.1-201ENST00000568244 1277 ntBASIC19.84■□□□□ 0.77
ABCD3P28288 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ABCD3P28288 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ABCD3P28288 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.84■□□□□ 0.77
ABCD3P28288 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCD3P28288 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCD3P28288 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCD3P28288 MIR935-201ENST00000401179 91 ntBASIC19.83■□□□□ 0.77
ABCD3P28288 AC123595.1-201ENST00000440769 1046 ntBASIC19.83■□□□□ 0.77
ABCD3P28288 RARRES2P6-201ENST00000567333 442 ntBASIC19.83■□□□□ 0.77
ABCD3P28288 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ABCD3P28288 TPRG1LP1-201ENST00000598702 760 ntBASIC19.83■□□□□ 0.77
ABCD3P28288 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.83■□□□□ 0.76
ABCD3P28288 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCD3P28288 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ABCD3P28288 ECEL1P1-201ENST00000373592 1742 ntBASIC19.82■□□□□ 0.76
ABCD3P28288 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 AC092053.2-201ENST00000640557 1818 ntBASIC19.82■□□□□ 0.76
ABCD3P28288 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ABCD3P28288 AC097381.1-201ENST00000429019 1296 ntBASIC19.82■□□□□ 0.76
ABCD3P28288 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCD3P28288 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.82■□□□□ 0.76
ABCD3P28288 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ABCD3P28288 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.82■□□□□ 0.76
ABCD3P28288 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.82■□□□□ 0.76
ABCD3P28288 AC009237.3-201ENST00000393279 1427 ntBASIC19.82■□□□□ 0.76
ABCD3P28288 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCD3P28288 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.82■□□□□ 0.76
ABCD3P28288 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCD3P28288 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ABCD3P28288 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ABCD3P28288 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCD3P28288 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.81■□□□□ 0.76
ABCD3P28288 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCD3P28288 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCD3P28288 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ABCD3P28288 MIR6821-201ENST00000617625 74 ntBASIC19.81■□□□□ 0.76
ABCD3P28288 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms